RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 IL37Q9NZH6 218 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
SNX17-201ENST00000233575 AMACRQ9UHK6 382 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 SCML2Q9UQR0 700 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 LINC01553A4QN01 128 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 CARNS1A5YM72 827 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 TEX28O15482 410 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 CA8P35219 290 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 CTNNB1P35222 781 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 RDXP35241 583 aaKnown RBP19.37■□□□□ 0.69
SNX17-201ENST00000233575 MAGEA10P43363 369 aaPredicted RBP19.37■□□□□ 0.69
SNX17-201ENST00000233575 DEUP1Q05D60 604 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 BOLA3Q53S33 107 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 TTC27Q6P3X3 843 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 TAC4Q86UU9 113 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 C17orf80Q9BSJ5 609 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 CALN1Q9BXU9 219 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 ANLNQ9NQW6 1124 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 GMIPQ9P107 970 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 MTUS1Q9ULD2 1270 aa19.37■□□□□ 0.69
SNX17-201ENST00000233575 GOLGA6L10A0A0M3HER8 536 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 ZSCAN5CA6NGD5 496 aaPredicted RBP19.36■□□□□ 0.69
SNX17-201ENST00000233575 CTSAP10619 480 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 ATF2P15336 505 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 DPYSL3Q14195 570 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 CLUL1Q15846 466 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 TAZQ16635 292 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 ERMARDQ5T6L9 678 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 DQX1Q8TE96 717 aaKnown RBP19.36■□□□□ 0.69
SNX17-201ENST00000233575 SPATA17Q96L03 361 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 MTIF3Q9H2K0 278 aaKnown RBP19.36■□□□□ 0.69
SNX17-201ENST00000233575 CYP4F11Q9HBI6 524 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 WDR6Q9NNW5 1121 aaKnown RBP19.36■□□□□ 0.69
SNX17-201ENST00000233575 DDIT4Q9NX09 232 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 GBF1Q92538 1859 aa19.36■□□□□ 0.69
SNX17-201ENST00000233575 I6L893 689 aaPredicted RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 PHF2O75151 1096 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 YWHAQP27348 245 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 BMPR1AP36894 532 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 COPS2P61201 443 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 TUBB4BP68371 445 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 RAB33AQ14088 237 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 SHHQ15465 462 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 BTBD8Q5XKL5 378 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 PYROXD2Q8N2H3 581 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 TEKT4Q8WW24 435 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 FBXO44Q9H4M3 255 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 FAM204AQ9H8W3 233 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 AP4E1Q9UPM8 1137 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 FAM92AA1XBS5 289 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 SLC38A8A6NNN8 435 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 MDM4O15151 490 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 CNPP09543 421 aaKnown RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 SPATA31D3P0C874 917 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 IL4RP24394 825 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 DNAJB1P25685 340 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 PTPN7P35236 360 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 KCNJ1P48048 391 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 ERVFC1P60507 584 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 RPL10AP62906 217 aaKnown RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 DYNLT1P63172 113 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 TAF10Q12962 218 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 PPP2R5EQ16537 467 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 CYP1B1Q16678 543 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 SPATA31D4Q6ZUB0 917 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 FBXO32Q969P5 355 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 MAGOHBQ96A72 148 aaKnown RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 HAUS1Q96CS2 278 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 NCAPGQ9BPX3 1015 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 DHX35Q9H5Z1 703 aaKnown RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 PCDH18Q9HCL0 1135 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 ABCC13Q9NSE7 274 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 MTMR10Q9NXD2 777 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 SFMBT1Q9UHJ3 866 aa19.35■□□□□ 0.69
SNX17-201ENST00000233575 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
SNX17-201ENST00000233575 CETN2P41208 172 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 VSNL1P62760 191 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 SNX1Q13596 522 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 KRT81Q14533 505 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 PPP6R3Q5H9R7 873 aaPredicted RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 TPGS2Q68CL5 300 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 MON1AQ86VX9 555 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 ANKRD7Q92527 254 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 CASP10Q92851 521 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 PGAP3Q96FM1 320 aaPredicted RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.34■□□□□ 0.69
SNX17-201ENST00000233575 SAE1Q9UBE0 346 aaPredicted RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 FZD10Q9ULW2 581 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 TTI1O43156 1089 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 MSI1O43347 362 aaKnown RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 L1CAMP32004 1257 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 TUFMP49411 452 aaKnown RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 TMC7Q7Z402 723 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 KCTD15Q96SI1 283 aaPredicted RBP19.34■□□□□ 0.69
SNX17-201ENST00000233575 RXFP1Q9HBX9 757 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 YIPF1Q9Y548 306 aa19.34■□□□□ 0.69
SNX17-201ENST00000233575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.33■□□□□ 0.68
SNX17-201ENST00000233575 CST8O60676 142 aa19.33■□□□□ 0.68
SNX17-201ENST00000233575 TJP3O95049 919 aa19.33■□□□□ 0.68
SNX17-201ENST00000233575 RTN3O95197 1032 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms