RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SCARA3Q6AZY7 606 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 OR6P1Q8NGX9 317 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 SEC14L1Q92503 715 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
RAB3D-201ENST00000222120 TXNRD2Q9NNW7 524 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 IL1RAPL1Q9NZN1 696 aa14.06□□□□□ -0.16
RAB3D-201ENST00000222120 GRIN3BO60391 1043 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 HOXC6P09630 235 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 GLRBP48167 497 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 BCAT1P54687 386 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 BEX3Q00994 111 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 CUL3Q13618 768 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 RPS6KA2Q15349 733 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 RNASEH2BQ5TBB1 312 aaKnown RBP14.05□□□□□ -0.16
RAB3D-201ENST00000222120 NAIF1Q69YI7 327 aaPredicted RBP14.05□□□□□ -0.16
RAB3D-201ENST00000222120 GTSE1Q9NYZ3 720 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 SLC39A10Q9ULF5 831 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 PPP2R3BQ9Y5P8 575 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 CSPG5O95196 566 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 MGAT1P26572 445 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 GBE1Q04446 702 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 RASA2Q15283 850 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 FASTKD1Q53R41 847 aaKnown RBP14.05□□□□□ -0.16
RAB3D-201ENST00000222120 PMF1Q6P1K2 205 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 SLC25A41Q8N5S1 370 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 TSC22D3Q99576 134 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 COL22A1Q8NFW1 1626 aaPredicted RBP14.05□□□□□ -0.16
RAB3D-201ENST00000222120 CLDN5O00501 218 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 B4GALT4O60513 344 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 ENTPD5O75356 428 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 B3GAT3O94766 335 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 FAM200BP0CF97 657 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 PDK1Q15118 436 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
RAB3D-201ENST00000222120 PDK4Q16654 411 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 PLPPR4Q7Z2D5 763 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 POU5F2Q8N7G0 328 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 IPMKQ8NFU5 416 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 TMEM109Q9BVC6 243 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 CNTNAP2Q9UHC6 1331 aa14.05□□□□□ -0.16
RAB3D-201ENST00000222120 DGKIO75912 1065 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 POLBP06746 335 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SIX1Q15475 284 aaPredicted RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ACCSLQ4AC99 568 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 PCYT2Q99447 389 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TRIM4Q9C037 500 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 NXF3Q9H4D5 531 aaKnown RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ACSS3Q9H6R3 686 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ETNK2Q9NVF9 386 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 GRID1Q9ULK0 1009 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 CASTOR2A6NHX0 329 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SMAPO00193 183 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TMEM63AO94886 807 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ICAM3P32942 547 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 BST2Q10589 180 aaKnown RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SLC10A6Q3KNW5 377 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 POLNQ7Z5Q5 900 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 XAB2Q9HCS7 855 aaKnown RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 NUDT5Q9UKK9 219 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ATP8B3O60423 1300 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SDR42E2A6NKP2 422 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 KPNA7A9QM74 516 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 FCHO1O14526 889 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 PMPCBO75439 489 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 UNC5CO95185 931 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 JCHAINP01591 159 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 GOT1P17174 413 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 AVPR1AP37288 418 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ASPAP45381 313 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TKTL1P51854 596 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 RABGGTBP53611 331 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 ART3Q13508 389 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 RABGAP1LQ5R372 815 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 PIGWQ7Z7B1 504 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TBC1D10AQ9BXI6 508 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 DNAJC16Q9Y2G8 782 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 CILPO75339 1184 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 HMBSP08397 361 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 GNAT1P11488 350 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 KCNA3P22001 575 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 GTF2A2P52657 109 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 USP10Q14694 798 aaKnown RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 EML3Q32P44 896 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 DCAF4L1Q3SXM0 396 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 SV2CQ496J9 727 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 NKD2Q969F2 451 aaPredicted RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 HDAC11Q96DB2 347 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 MTBPQ96DY7 904 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 L3MBTL3Q96JM7 780 aaPredicted RBP14.04□□□□□ -0.16
RAB3D-201ENST00000222120 EPAS1Q99814 870 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TASP1Q9H6P5 420 aa14.04□□□□□ -0.16
RAB3D-201ENST00000222120 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
RAB3D-201ENST00000222120 ABHD2P08910 425 aa14.03□□□□□ -0.16
RAB3D-201ENST00000222120 TGM2P21980 687 aa14.03□□□□□ -0.16
RAB3D-201ENST00000222120 ACADSBP45954 432 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms