RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CTCFP49711 727 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 ATP1A2P50993 1020 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 ATXN1P54253 815 aaKnown RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 AIF1P55008 147 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 DEUP1Q05D60 604 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 KYNUQ16719 465 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 SKIDA1Q1XH10 827 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 CCDC185Q8N715 623 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 ZMIZ2Q8NF64 920 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 NDRG1Q92597 394 aaKnown RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 KCNK16Q96T55 309 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 ADAM33Q9BZ11 813 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 PHACTR1Q9C0D0 580 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 DMAP1Q9NPF5 467 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 NINJ2Q9NZG7 142 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 FZD10Q9ULW2 581 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 TRIM17Q9Y577 477 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 HEY1Q9Y5J3 304 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 AGTP01019 485 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 MAGOHP61326 146 aaKnown RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 PPP2R2AP63151 447 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 GNGT1P63211 74 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 YWHAHQ04917 246 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 RNASELQ05823 741 aaKnown RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 DSC1Q08554 894 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 FAM131BQ86XD5 332 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 CDKL3Q8IVW4 592 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 IRGQQ8WZA9 623 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 PRCCQ92733 491 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 TLCD1Q96CP7 247 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 TRIM62Q9BVG3 475 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 C10orf88Q9H8K7 445 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 PNPLA8Q9NP80 782 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 TMEM161AQ9NX61 479 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 FARP1Q9Y4F1 1045 aaPredicted RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 TSC2P49815 1807 aa18.08■□□□□ 0.49
VRK1-201ENST00000216639 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.08■□□□□ 0.48
VRK1-201ENST00000216639 BCLAF3A2AJT9 711 aaKnown RBP18.08■□□□□ 0.48
VRK1-201ENST00000216639 TMEM189-UBE2V1I3L0A0 370 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 TRAPPC3O43617 180 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 LTFP02788 710 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 ATP5DP30049 168 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 CDK7P50613 346 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 XRCC4Q13426 336 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 CLLU1OSQ5K130 101 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 MFSD5Q6N075 450 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 C4orf22Q6V702 233 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 C4orf50Q6ZRC1 276 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 BZW1Q7L1Q6 419 aaKnown RBP18.08■□□□□ 0.48
VRK1-201ENST00000216639 BNIPLQ7Z465 357 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 LINC01599Q8WXQ3 324 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 PWWP2AQ96N64 755 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 SERPINB12Q96P63 405 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 CSPG4P5Q96PW8 444 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 KCTD15Q96SI1 283 aaPredicted RBP18.08■□□□□ 0.48
VRK1-201ENST00000216639 SLC9A7Q96T83 725 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.48
VRK1-201ENST00000216639 PAK5Q9P286 719 aa18.08■□□□□ 0.48
VRK1-201ENST00000216639 SMIM23A6NLE4 172 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 HHLA1C9JL84 531 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 H3BRJ5 948 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 NRP1O14786 923 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 ABHD2P08910 425 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 USP17L7P0C7H9 530 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 BDNFP23560 247 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 ARL4CP56559 192 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 NME3Q13232 169 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 HIF1AQ16665 826 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 EFHC2Q5JST6 749 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 ABI1Q8IZP0 508 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 SCML4Q8N228 414 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 SLC7A14Q8TBB6 771 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 EPS8L3Q8TE67 593 aaKnown RBP18.07■□□□□ 0.48
VRK1-201ENST00000216639 PKMYT1Q99640 499 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 CNOT10Q9H9A5 744 aaKnown RBP18.07■□□□□ 0.48
VRK1-201ENST00000216639 MTMR10Q9NXD2 777 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 NAALADL1Q9UQQ1 740 aa18.07■□□□□ 0.48
VRK1-201ENST00000216639 SYNJ2BP-COX16A0A087WUM0 186 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 A0A087WUV0 522 aaPredicted RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 ERICH4A6NGS2 130 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 YJEFN3A6XGL0 299 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 E7ENQ6 273 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 EIF3HO15372 352 aaKnown RBP eCLIP18.06■□□□□ 0.48
VRK1-201ENST00000216639 TCEA3O75764 348 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 DDHD2O94830 711 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 F9P00740 461 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 ITGB1P05556 798 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 NCAM1P13591 858 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 OR1G1P47890 313 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 IRAK1P51617 712 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 CACNA2D1P54289 1103 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 BASP1P80723 227 aaKnown RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 STAT4Q14765 748 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 UBAP2Q5T6F2 1119 aaKnown RBP18.06■□□□□ 0.48
VRK1-201ENST00000216639 SYPL2Q5VXT5 272 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 HFE2Q6ZVN8 426 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 GPRIN1Q7Z2K8 1008 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 ZNF280BQ86YH2 543 aa18.06■□□□□ 0.48
VRK1-201ENST00000216639 SPATA2LQ8IUW3 424 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms