RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 PNOCQ13519 176 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 EDRF1Q3B7T1 1238 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 C10orf120Q5SQS8 335 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 N4BP2L1Q5TBK1 243 aaPredicted RBP15.79■□□□□ 0.12
UPK3A-201ENST00000216211 GRAMD4Q6IC98 578 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 SCD5Q86SK9 330 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 MIB1Q86YT6 1006 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 TMEFF1Q8IYR6 380 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 PIGKQ92643 395 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 SPACA7Q96KW9 195 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 HEXIM2Q96MH2 286 aaKnown RBP15.79■□□□□ 0.12
UPK3A-201ENST00000216211 XPO6Q96QU8 1125 aaKnown RBP15.79■□□□□ 0.12
UPK3A-201ENST00000216211 LSM14BQ9BX40 385 aaKnown RBP15.79■□□□□ 0.12
UPK3A-201ENST00000216211 BBS2Q9BXC9 721 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 MBD1Q9UIS9 605 aaPredicted RBP15.79■□□□□ 0.12
UPK3A-201ENST00000216211 DNMT3LQ9UJW3 386 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 NAGPAQ9UK23 515 aa15.79■□□□□ 0.12
UPK3A-201ENST00000216211 KMT2BQ9UMN6 2715 aaPredicted RBP15.78■□□□□ 0.12
UPK3A-201ENST00000216211 C4orf47A7E2U8 309 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 KHNYNO15037 678 aaKnown RBP15.78■□□□□ 0.12
UPK3A-201ENST00000216211 MAP3K13O43283 966 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 CACNG3O60359 315 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 MBD3O95983 291 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 GTF2H1P32780 548 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 PLA2G4AP47712 749 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 MXI1P50539 228 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 MCCD1P59942 119 aaPredicted RBP15.78■□□□□ 0.12
UPK3A-201ENST00000216211 MAP7D1Q3KQU3 841 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 EGFLAMQ63HQ2 1017 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 NUDT18Q6ZVK8 323 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 ARMCX6Q7L4S7 300 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 LPCAT2Q7L5N7 544 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 CCDC186Q7Z3E2 898 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 TRMT11Q7Z4G4 463 aaKnown RBP15.78■□□□□ 0.12
UPK3A-201ENST00000216211 FBXL13Q8NEE6 735 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 KCNV2Q8TDN2 545 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 ERLEC1Q96DZ1 483 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 ARID3AQ99856 593 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 DNAI2Q9GZS0 605 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 CISHQ9NSE2 258 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 RAB20Q9NX57 234 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 USP3Q9Y6I4 520 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 ACACBO00763 2458 aa15.78■□□□□ 0.12
UPK3A-201ENST00000216211 CETN3O15182 167 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 KCNK5O95279 499 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 EPB41P11171 864 aaKnown RBP15.77■□□□□ 0.12
UPK3A-201ENST00000216211 HOXB2P14652 356 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 GABRG2P18507 467 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 KLHDC10Q6PID8 442 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 Q6ZNB5 142 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 TOGARAM2Q6ZUX3 1019 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 SLC4A11Q8NBS3 891 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 TATDN2Q93075 761 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 BHMTQ93088 406 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 TMEM176AQ96HP8 235 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 ACOX2Q99424 681 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 PLK2Q9NYY3 685 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 MARK1Q9P0L2 795 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 WDR35Q9P2L0 1181 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 RASAL2Q9UJF2 1139 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 STARD13Q9Y3M8 1113 aa15.77■□□□□ 0.12
UPK3A-201ENST00000216211 CHD8Q9HCK8 2581 aa15.77■□□□□ 0.11
UPK3A-201ENST00000216211 ATXN2Q99700 1313 aaKnown RBP15.76■□□□□ 0.11
UPK3A-201ENST00000216211 PRRT4C9JH25 899 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 STC2O76061 302 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 HMBSP08397 361 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 CISD3P0C7P0 127 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 RALAP11233 206 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 NTSR1P30989 418 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 PRCPP42785 496 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 PTGER3P43115 390 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 DGKGP49619 791 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 PSEN1P49768 467 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 RAD23BP54727 409 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 IRX4P78413 519 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 DCAF17Q5H9S7 520 aaPredicted RBP15.76■□□□□ 0.11
UPK3A-201ENST00000216211 TCERG1LQ5VWI1 586 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 PSAPL1Q6NUJ1 521 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 TADA2BQ86TJ2 420 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 FMR1NBQ8N0W7 255 aaPredicted RBP15.76■□□□□ 0.11
UPK3A-201ENST00000216211 P2RY11Q96G91 374 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 CCDC34Q96HJ3 373 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 TMEM9BQ9NQ34 198 aa15.76■□□□□ 0.11
UPK3A-201ENST00000216211 MAP1BP46821 2468 aaKnown RBP15.75■□□□□ 0.11
UPK3A-201ENST00000216211 GON4LQ3T8J9 2241 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 EPG5Q9HCE0 2579 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 A0A1W2PQF6 199 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CDX4O14627 284 aaPredicted RBP15.75■□□□□ 0.11
UPK3A-201ENST00000216211 STX10O60499 249 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 PMLP29590 882 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 EFEMP1Q12805 493 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 BYSLQ13895 437 aaKnown RBP15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CBWD6Q4V339 395 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 TRIM61Q5EBN2 209 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CBWD3Q5JTY5 395 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CBWD5Q5RIA9 395 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 CHPFQ8IZ52 775 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 ZNF276Q8N554 614 aa15.75■□□□□ 0.11
UPK3A-201ENST00000216211 TTC39CQ8N584 583 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms