RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TFE3P19532 575 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ATP1A4Q13733 1029 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ACAP1Q15027 740 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 PDK3Q15120 406 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 TKFCQ3LXA3 575 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 TATDN1Q6P1N9 297 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 EXOC8Q8IYI6 725 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 GMCL1P1Q8NEA9 526 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 RFWD2Q8NHY2 731 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 SYTL5Q8TDW5 730 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 SGF29Q96ES7 293 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 GID8Q9NWU2 228 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 NKX1-2Q9UD57 310 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 FSCN2O14926 492 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ALADP13716 330 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 MRPS22P82650 360 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 YWHAHQ04917 246 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 SLC5A9Q2M3M2 681 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 LIN52Q52LA3 116 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 CXCL17Q6UXB2 119 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ALYREFQ86V81 257 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 COPS5Q92905 334 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 CLPTM1LQ96KA5 538 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 CNDP1Q96KN2 507 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 NR1H4Q96RI1 486 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 RIT2Q99578 217 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 GRHL1Q9NZI5 618 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ATXN10Q9UBB4 475 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 DGAT1O75907 488 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 RTN3O95197 1032 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 RALBP11234 206 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 BST1Q10588 318 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 USP10Q14694 798 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ADRM1Q16186 407 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 TWF2Q6IBS0 349 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 PLEKHA7Q6IQ23 1121 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 WDR35Q9P2L0 1181 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 IPO11Q9UI26 975 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 COG5Q9UP83 839 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 V9GYQ6 96 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 GLRA3O75311 464 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 SPRP35270 261 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 PSMD7P51665 324 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 CHN2P52757 468 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 FOXD4Q12950 439 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ITGA9Q13797 1035 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ANO7Q6IWH7 933 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ZDHHC24Q6UX98 284 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 RBM44Q6ZP01 1051 aaKnown RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 DENND5BQ6ZUT9 1274 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ARRDC4Q8NCT1 418 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 GSTCDQ8NEC7 633 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF398Q8TD17 642 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 SOCS4Q8WXH5 440 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF669Q96BR6 464 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 TMEM109Q9BVC6 243 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 NMUR2Q9GZQ4 415 aa11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 ILKAPQ9H0C8 392 aaPredicted RBP11.91□□□□□ -0.5
DNMT3B-201ENST00000201963 TAF1P21675 1872 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 H0YGN5 161 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 ZMPSTE24O75844 475 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 ZNF286BP0CG31 522 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 FOXN2P32314 431 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 TRPC1P48995 793 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 USP4Q13107 963 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 INPP5AQ14642 412 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 CST9Q5W186 159 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 MTHFD1LQ6UB35 978 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 ULK2Q8IYT8 1036 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 LENG1Q96BZ8 264 aaPredicted RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 MXRA8Q9BRK3 442 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 MMADHCQ9H3L0 296 aaPredicted RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 EFCAB1Q9HAE3 211 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SLC17A7Q9P2U7 560 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 CDYLQ9Y232 598 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 R3HDM2Q9Y2K5 976 aaKnown RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 NFS1Q9Y697 457 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SLITRK3O94933 977 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 NCKAP1LP55160 1127 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 C16orf46Q6P387 395 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 CDR2LQ86X02 465 aaPredicted RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SIX6OS1Q8N1H7 587 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 LRRC71Q8N4P6 559 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SEPT1Q8WYJ6 367 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 FAXDC2Q96IV6 333 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 TEPSINQ96N21 525 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 TMEM79Q9BSE2 394 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 KCNK4Q9NYG8 393 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 WASF2Q9Y6W5 498 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SMIM31A0A1B0GVY4 71 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 MARSP56192 900 aaKnown RBP11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 SOX10P56693 466 aa11.9□□□□□ -0.5
DNMT3B-201ENST00000201963 FAM110CQ1W6H9 321 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms