RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 NRP1O14786 923 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 IFNB1P01574 187 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 FYNP06241 537 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CAPN2P17655 700 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CYP2F1P24903 491 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 NR2C2P49116 596 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CACNA2D1P54289 1103 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 DCAF6Q58WW2 860 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 ZNF771Q7L3S4 317 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 COLGALT2Q8IYK4 626 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CCDC185Q8N715 623 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 OR10T2Q8NGX3 314 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 NDRG1Q92597 394 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 NTAN1Q96AB6 310 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 KCTD15Q96SI1 283 aaPredicted RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 RBM15Q96T37 977 aaKnown RBP eCLIP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 KCNK16Q96T55 309 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 CAPS2Q9BXY5 557 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 DHX35Q9H5Z1 703 aaKnown RBP14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 USP29Q9HBJ7 922 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
RTFDC1-201ENST00000023939 ALOX15BO15296 676 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 EIF3HO15372 352 aaKnown RBP eCLIP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 DDHD2O94830 711 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 OAZ2O95190 189 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 ZBED1O96006 694 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 ITGB1P05556 798 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 CTCFP49711 727 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 ATXN1P54253 815 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 TSPY1Q01534 308 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 PLEKHG4Q58EX7 1191 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 UBAP2Q5T6F2 1119 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 DARS2Q6PI48 645 aaKnown RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 NPNTQ6UXI9 565 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 BHLHA9Q7RTU4 235 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 GPRIN1Q7Z2K8 1008 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 NAT8LQ8N9F0 302 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 FAM71DQ8N9W8 422 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 CPT1BQ92523 772 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 TTC25Q96NG3 672 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 CSPG4P5Q96PW8 444 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 TRIM62Q9BVG3 475 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 STMN4Q9H169 189 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 DMAP1Q9NPF5 467 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 PAK6Q9NQU5 681 aaPredicted RBP14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
RTFDC1-201ENST00000023939 YJEFN3A6XGL0 299 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 E7ENQ6 273 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 RASGRF2O14827 1237 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 B4GALT3O60512 393 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 NBNO60934 754 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 AGTP01019 485 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 MAGEA4P43358 317 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 SCAPQ12770 1279 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 GPNMBQ14956 572 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 KYNUQ16719 465 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 PAN2Q504Q3 1202 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 PPP6R3Q5H9R7 873 aaPredicted RBP14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 C4orf22Q6V702 233 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 HFE2Q6ZVN8 426 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 LRRTM3Q86VH5 581 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 ZNF280BQ86YH2 543 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 SERPINB12Q96P63 405 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 CENPHQ9H3R5 247 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 LRRC4CQ9HCJ2 640 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 CWC15Q9P013 229 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 TRIM17Q9Y577 477 aa14.87□□□□□ -0.03
RTFDC1-201ENST00000023939 SF3B1O75533 1304 aaKnown RBP eCLIP14.86□□□□□ -0.036e-6■■■■■ 90.4
RTFDC1-201ENST00000023939 SRRM3A6NNA2 597 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 H7C0C1 242 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 M0QYT0 321 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ENPP3O14638 875 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 F9P00740 461 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 LTFP02788 710 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ACTN2P35609 894 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ARL4AP40617 200 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ATP5OP48047 213 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 IRAK1P51617 712 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 YWHAHQ04917 246 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 DEUP1Q05D60 604 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 C1orf228Q6PIY5 440 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 C4orf50Q6ZRC1 276 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 CENPUQ71F23 418 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 FAM131BQ86XD5 332 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 CDKL3Q8IVW4 592 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 APBB2Q92870 758 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 PWWP2AQ96N64 755 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 C10orf88Q9H8K7 445 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 TMLHEQ9NVH6 421 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 PAK5Q9P286 719 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 NAALADL1Q9UQQ1 740 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 E7ESA3 106 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 H3BRJ5 948 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 RGS16O15492 202 aaPredicted RBP14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 TRAPPC3O43617 180 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 ACSL3O95573 720 aa14.86□□□□□ -0.03
RTFDC1-201ENST00000023939 BDNFP23560 247 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms