RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Zc3h10Q8R205 435 aaKnown RBP15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Hps3Q91VB4 1002 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 LipfQ9CPP7 395 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Scyl3Q9DBQ7 735 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Sertad3Q9ERC3 197 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Znf354bQ9QXT9 601 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Coro1bQ9WUM3 484 aaKnown RBP15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Kat6aQ8BZ21 2003 aa15.19■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Tbc1d25A1A5B6 742 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Herc3A6H6S0 1050 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Vmn2r63E9Q0K5 859 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Gm9268E9Q0M3 861 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Vmn2r54K7N649 806 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Vmn2r62K7N712 859 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Edil3O35474 480 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 LcatP16301 438 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Nub1P54729 614 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 RalaP63321 206 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Upf3bQ3ULL6 472 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Foxn3Q499D0 457 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Scube3Q66PY1 993 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Atg9bQ6EBV9 922 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 SyncripQ7TMK9 623 aaKnown RBP15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Wdr3Q8BHB4 942 aaKnown RBP15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Iqcb1Q8BP00 598 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Klhl11Q8CE33 709 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pcdhgb5Q91XX5 926 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Sgf29Q9DA08 293 aaKnown RBP15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Tmem196V9GX04 182 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 NbeaQ9EPN1 2936 aa15.18■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Gm13283A0A087WPG5 182 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 SafbD3YXK2 937 aaKnown RBP15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pgbd5D3YZI9 523 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Gm7714E9Q079 131 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Mup5P11591 180 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Abcb4P21440 1276 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 GcP21614 476 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Adh5P28474 374 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ssrp1Q08943 708 aaKnown RBP15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ric8aQ3TIR3 530 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Garem1Q3UFT3 876 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Nlrc4Q3UP24 1024 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ermp1Q3UVK0 898 aaKnown RBP15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Adck2Q6NSR3 617 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Snx31Q6P8Y7 439 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Aggf1Q7TN31 711 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Znf12Q7TSI0 686 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Mettl20Q80ZM3 255 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 C8bQ8BH35 589 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pum3Q8BKS9 647 aaKnown RBP15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Slc7a14Q8BXR1 771 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pcyox1lQ8C7K6 495 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Txndc11Q8K2W3 948 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ppa2Q91VM9 330 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Rilpl2Q99LE1 197 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 1700123K08RikQ9D991 295 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Cts8Q9JI81 333 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Nfkb2Q9WTK5 899 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Grin2dQ03391 1323 aa15.17■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 OtofQ9ESF1 1997 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Lcn6A2AJB9 181 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Fam43bA2AM80 330 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Hsd17b14E9Q3D4 273 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Nr3c1P06537 783 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pdia4P08003 638 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Fkbp3Q62446 224 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Zfp251Q6PCX8 632 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Fbxo22Q78JE5 402 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ankzf1Q80UU1 748 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Gm5622Q810Q0 167 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 AsphQ8BSY0 741 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Apol9bQ8C7I4 310 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Vcpip1Q8CDG3 1220 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Grtp1Q9D3N8 359 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 CoasyQ9DBL7 563 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Tlr9Q9EQU3 1032 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Aldh1a3Q9JHW9 512 aa15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Orc1Q9Z1N2 840 aaKnown RBP15.16■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Cacna1dQ99246 2179 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Cdc27A2A6Q5 825 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Bpifb4A2BGH0 617 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Zfp839E9PUU5 921 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Dapk3O54784 448 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Limk2O54785 638 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Sp3O70494 783 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Coro1aO89053 461 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 MyogP12979 224 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 RdxP26043 583 aaKnown RBP15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Q3TQQ9 903 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Dusp23Q6NT99 150 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Mvb12aQ78HU3 271 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Txndc16Q7TN22 820 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Pced1bQ8BGX1 433 aaKnown RBP15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 PigtQ8BXQ2 582 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 CrebrfQ8CDG5 640 aaKnown RBP15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ago1Q8CJG1 857 aaKnown RBP15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Mtrf1Q8K126 446 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Brd3Q8K2F0 726 aaKnown RBP15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Ace2Q8R0I0 805 aa15.15■□□□□ 0.02
Ccdc88c-204ENSMUST00000223097 Angel1Q8VCU0 667 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms