RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Rnf10Q3UIW5 804 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam126aQ6P9N1 521 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Abcf3Q8K268 709 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PolbQ8K409 335 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ccdc59Q8R2N0 240 aaKnown RBP10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Reep2Q8VCD6 254 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PyglQ9ET01 850 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 GraspQ9JJA9 392 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Il18rapQ9Z2B1 614 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Htatip2Q9Z2G9 242 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Serpinb6cW4VSP4 379 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Cct8P42932 548 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tbx4P70325 552 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Grid1Q61627 1009 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Brinp2Q6DFY8 783 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rnf208Q8K0W3 265 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Piwil1Q9JMB7 862 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam205aA2APU8 1308 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Slc6a16A0A1L1SR47 742 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Magea8O89012 320 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hpcal1P62748 193 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tgfbrap1Q3UR70 860 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gja6Q6S5G4 283 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Pramef12Q9D2F1 463 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Timm50Q9D880 353 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tm9sf1Q9DBU0 606 aa10.71□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Zscan4-ps1A0A1C7CYV3 506 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Tubb1A2AQ07 451 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zscan4dA7KBS4 506 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Eef2kO08796 724 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 PuraP42669 321 aaKnown RBP10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 GsapQ3TCV3 858 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zscan4fQ3URS2 506 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zscan4cQ80VJ6 506 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gper1Q8BMP4 375 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gtf3c4Q8BMQ2 817 aaKnown RBP10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Wdr11Q8K1X1 1223 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mrpl2Q9D773 306 aaKnown RBP10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Limd1Q9QXD8 668 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ak1Q9R0Y5 194 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gbp11A9YVJ5 442 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nipsnap3aB1AWZ3 247 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Kctd17E0CYQ0 296 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 KeraO35367 351 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Aldh3b1Q80VQ0 468 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Usp20Q8C6M1 916 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Rsl24d1Q99L28 163 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gins4Q99LZ3 223 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 1700003F12RikA2AKE5 210 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gm12794L7MTS5 483 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Eno2P17183 434 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nat9Q3UG98 241 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Grm4Q68EF4 912 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mvb12bQ6KAU4 317 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gtf2a2Q80ZM7 109 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Chn1Q91V57 459 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Bco2Q99NF1 532 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Nudt5Q9JKX6 218 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Crb1Q8VHS2 1405 aa10.71□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Lrrc14bQ3UJB3 510 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Sfmbt2Q5DTW2 938 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ugt2a2Q6PDD0 528 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Iars2Q8BIJ6 1012 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Rps6kl1Q8R2S1 544 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mrpl57Q9CQF8 102 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Slc34a2Q9DBP0 697 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Clip3B9EHT4 547 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Plin2P43883 425 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Erbb2P70424 1256 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dpy19l3Q71B07 716 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dis3lQ8C0S1 1053 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zfp57Q8C6P8 421 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Dedd2Q8QZV0 330 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ilf2Q9CXY6 390 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Slc22a3Q9WTW5 551 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Hmgxb3G3X9M3 1254 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Klc1O88447 541 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Pdx1P52946 284 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 MarsQ68FL6 902 aaKnown RBP10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Clca4aQ6Q473 924 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Spata20Q80YT5 790 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 GskipQ8BGR8 139 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Trim9Q8C7M3 817 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 PdxkQ8K183 312 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mapre2Q8R001 326 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Stard13Q923Q2 1113 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Duoxa2Q9D311 320 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ddi1Q9DAF3 408 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Mrpl40Q9Z2Q5 206 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Umodl1Q5DID3 1319 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Ankrd63A2ARS0 390 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Alkbh1P0CB42 389 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 AurkaP97477 395 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 SPINDOCQ05AH6 381 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Gm11437Q5QR91 290 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Phlda1Q62392 405 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Chn2Q80XD1 332 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Zfp398Q8BV16 643 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 Vps9d1Q8C190 649 aa10.7□□□□□ -0.7
Scn9a-201ENSMUST00000100063 AfpP02772 605 aa10.7□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms