RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Rbp3P49194 1234 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Dok7Q18PE0 504 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cyp2c29Q64458 490 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Thoc5Q8BKT7 683 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Prkaa2Q8BRK8 552 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Akt3Q9WUA6 479 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Cdc42bpbQ7TT50 1713 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pds5aQ6A026 1332 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gm45208A0A140LJ36 292 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Olfr1145A2AVC7 325 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Atp8b5A3FIN4 1183 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Siah3B2RWG3 268 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ccnb1ip1D3Z3K2 276 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 DgkdE9PUQ8 1220 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Kif1cO35071 1100 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mcpt1P11034 246 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tlx1P43345 332 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Akr1c6P70694 323 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Grin2cQ01098 1239 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rnf145Q5SWK7 663 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Atp6v0d2Q80SY3 350 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Znf579Q80VM4 562 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Hmgxb4Q80Y32 594 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Klhl42Q8BFQ9 493 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 GancQ8BVW0 898 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Spire2Q8K1S6 718 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 ZwilchQ8R060 589 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tmem82Q8R115 356 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Exd2Q8VEG4 650 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 MyocdQ8VIM5 935 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pcdha9Q91Y11 979 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 BrdtQ91Y44 956 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 PpidQ9CR16 370 aaKnown RBP10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tnfrsf21Q9EPU5 655 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sertad2Q9JJG5 309 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Dnajc12Q9R022 198 aa10.54□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mageb2A2AHM0 380 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ildr2B5TVM2 661 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Srsf11E9Q6E5 511 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 JhyE9Q793 770 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Klhl33G3UW92 533 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mt-CybP00158 381 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ncam1P13595 1115 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Celf1P28659 486 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Alox5P48999 674 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Spdye4aQ5IBH6 268 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pik3r5Q5SW28 871 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rnf139Q7TMV1 668 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ube2q1Q7TSS2 422 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ugt2a1Q80X89 528 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Noc4lQ8BHY2 516 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pkp2Q9CQ73 795 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rprd1bQ9CSU0 326 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mageb3Q9D2H4 330 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Hipk3Q9ERH7 1192 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Klhl4B1AZR0 717 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Gria1P23818 907 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Atp6v1e1P50518 226 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 HpcaP84075 193 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Klra6Q60653 266 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Grik1Q60934 836 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ahcyl2Q68FL4 613 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Inpp4bQ6P1Y8 924 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Scgb2b2Q6UGQ3 114 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ubash3bQ8BGG7 638 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tbc1d17Q8BYH7 645 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 BroxQ8K2Q7 411 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ttc8Q8VD72 515 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Smg8Q8VE18 991 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Smim11aQ99J19 55 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pacsin3Q99JB8 424 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Thg1lQ9CY52 298 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tubgcp4Q9D4F8 667 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tmem59Q9QY73 323 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 H2-M9O19442 342 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Capn6O35646 641 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Epha3P29319 983 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ccser2Q3UHI0 833 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tars2Q3UQ84 723 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 2900092C05RikQ5I0V9 184 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Dlg1Q811D0 905 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pi4kbQ8BKC8 816 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Ugt2b34Q8K154 532 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tbc1d19Q8VDV7 526 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Nsmce2Q91VT1 247 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Fam111aQ9D2L9 613 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 DcpsQ9DAR7 338 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 CltcQ68FD5 1675 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mbl1P39039 239 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Mief2Q5NCS9 454 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 BoraQ8BS90 525 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Lig4Q8BTF7 911 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pcdhb1Q91Y08 818 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Sike1Q9CPR7 207 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Tmem53Q9D0Z3 276 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Pou5f2Q9DAC9 329 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Rad18Q9QXK2 509 aaKnown RBP10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Hs6st1Q9QYK5 411 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Fam205a1D3YZF6 1314 aa10.53□□□□□ -0.72
Lig4-201ENSMUST00000095476 Glt1d1A4FUP9 346 aa10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms