RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Xkr4Q5GH67 647 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Jak3Q62137 1100 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rundc3bQ6PDC0 408 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cfap97Q6ZPR1 541 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Deup1Q7M6Y5 601 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pgrmc2Q80UU9 217 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pcmtd2Q8BHD8 359 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 H2-Q4Q8HWB2 354 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nckap1lQ8K1X4 1134 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Irf2bplQ8K3X4 775 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sirt3Q8R104 334 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nol6Q8R5K4 1152 aaKnown RBP9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 PlvapQ91VC4 438 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pcdhga9Q91XX9 932 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pcdhga6Q91XY2 932 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pcdhga12Q91XY7 932 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyp4f3Q99N16 524 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cby3Q9CVN6 235 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dusp12Q9D0T2 339 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Hddc3Q9D114 179 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Extl2Q9ES89 330 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Asap1Q9QWY8 1147 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tspan3Q9QY33 253 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Wnt8bQ9WUD6 350 aa9.44□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Arfgef2A2A5R2 1792 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm11127A7VMS2 374 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 BC035947B2RQY6 695 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fam71aB7XG49 585 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Rexo5D3YW29 759 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gm8126E9Q1N7 198 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Scgb1b19F6WYW0 93 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Exoc7O35250 697 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nme2Q01768 152 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Pyroxd1Q3TMV7 498 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tbc1d32Q3URV1 1296 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 St8sia4Q64692 359 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gpr62Q80UC6 358 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mfn1Q811U4 741 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Atl1Q8BH66 558 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp113Q8C689 439 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Gimap7Q8R379 293 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cdk8Q8R3L8 464 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Olfr1324Q8VEU7 332 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 HnrnprQ8VHM5 632 aaKnown RBP9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 KarsQ99MN1 595 aaKnown RBP9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Prl7c1Q9CRB5 251 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ube3bQ9ES34 1070 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Scgb2b20Q9JI02 112 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TapbpQ9R233 465 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 H2afb1S4R1E0 115 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nsd3Q6P2L6 1439 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sos2Q02384 1333 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Bicdl1A0JNT9 577 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dennd5bA2RSQ0 1274 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ces1bD3Z5G7 567 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lilra5D3Z7A9 295 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp605E9QAH2 694 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Msl3l2G3X992 371 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mettl7a3G3X9G9 244 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Per3O70361 1113 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Surf1P09925 306 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyp2a5P20852 494 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 ItgalP24063 1163 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Kif3aP28741 701 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TshrP47750 764 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mcm4P49717 862 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 AdslP54822 484 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cpt1aP97742 773 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cyfip2Q5SQX6 1253 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Fzd6Q61089 709 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Txndc15Q6P6J9 344 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Prl3a1Q78Y73 227 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Dusp4Q8BFV3 398 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 F13a1Q8BH61 732 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Anapc5Q8BTZ4 740 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cnot6Q8K3P5 557 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lrrc42Q8R2U7 421 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Creb3l3Q91XE9 479 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 PawrQ925B0 333 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Sec14l2Q99J08 403 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 NonoQ99K48 473 aaKnown RBP9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Mrpl42Q9CPV3 142 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Q9CQF4 240 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Cap2Q9CYT6 476 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 TarsQ9D0R2 722 aaKnown RBP9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Tmem206Q9D771 350 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Avpi1Q9D7H4 142 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ccdc86Q9JJ89 426 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ing1Q9QXV3 279 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Adam11Q9R1V4 773 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Usp18Q9WTV6 368 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 March7Q9WV66 693 aa9.43□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lrrc74aA0A1Y7VMD6 494 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Zfp597E9Q6S0 419 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Psmd14O35593 310 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nudt10P0C027 164 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Nudt11P0C028 164 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Lamp1P11438 406 aaKnown RBP9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Epb42P49222 691 aa9.42□□□□□ -0.9
Upf3b-201ENSMUST00000076265 Ruvbl1P60122 456 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms