RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Smok3aC0HKC8 504 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Smok3bC0HKC9 504 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 AgxtO35423 414 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cyp4f37Q3V1F1 546 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ifnl2Q4VK74 193 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Trim61Q8JZK6 461 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Catsper1Q91ZR5 686 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Slc12a9Q99MR3 914 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Poc5Q9DBS8 558 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Sfmbt1Q9JMD1 863 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Diaph3Q9Z207 1171 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Mrpl40Q9Z2Q5 206 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Gimd1E9PW74 217 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Lrrc74bQ14BP6 391 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Fam189a2Q4FZH1 290 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Il33Q8BVZ5 266 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Pop1Q8K205 1045 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Grk2Q99MK8 689 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Sppl3Q9CUS9 384 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ankef1Q9D2J7 775 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Dtwd1Q9D8U7 304 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 MrgbpQ9DAT2 204 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Sgk1Q9WVC6 431 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Pdpk1Q9Z2A0 559 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cdr2lA2A6T1 465 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 1700024B05RikE9Q6D7 167 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 EsrraO08580 422 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cyp2f2P33267 491 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 BtkP35991 659 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Acsl1P41216 699 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 DmpkP54265 631 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cyp2c39P56656 490 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Trim72Q1XH17 477 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cyp3a11Q64459 504 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 HpseQ6YGZ1 535 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Znf76Q8BMU0 568 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Spag16Q8K450 639 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Pdik1lQ8QZR7 341 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Adi1Q99JT9 179 aa11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Chordc1Q9D1P4 331 aaKnown RBP11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Atp13a1Q9EPE9 1200 aaKnown RBP11.8□□□□□ -0.52
Trim23-203ENSMUST00000069187 Lamb2Q61292 1799 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Tnfrsf14A0A1W2P7D5 276 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Erich2E9Q1A6 463 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ifnar2O35664 513 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 AfmO89020 608 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 LmnaP48678 665 aaKnown RBP11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 InhbaQ04998 424 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Kcna4Q61423 654 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Slc26a2Q62273 739 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Arhgap10Q6Y5D8 786 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Znf579Q80VM4 562 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Chst12Q99LL3 419 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Plscr1Q9JJ00 328 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Pdzd4Q9QY39 772 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cdc42ep5Q9Z0X0 150 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Vmn2r87E9PZX4 848 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Banf1O54962 89 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 ZfrO88532 1074 aaKnown RBP11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 VegfbP49766 207 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 St3gal1P54751 337 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 CblbQ3TTA7 982 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 MyrfQ3UR85 1138 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Olfr299Q7TS05 330 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 RimklbQ80WS1 387 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Elac2Q80Y81 831 aaKnown RBP11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Bclaf1Q8K019 919 aaKnown RBP11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 DenrQ9CQJ6 198 aaKnown RBP11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ubxn11Q9D572 484 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Rasgrp2Q9QUG9 608 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 Fbxo16Q9QZM9 334 aa11.79□□□□□ -0.52
Trim23-203ENSMUST00000069187 TroapB7ZNG4 668 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Spata31d1dE9Q5W2 1247 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Gm5145F8VQ88 278 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Phkg1P07934 388 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Hsd11b2P51661 386 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Fitm2P59266 262 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 4930502E18RikQ14BQ3 236 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Arhgap17Q3UIA2 846 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Lipo3Q3UT41 399 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ubn1Q4G0F8 1135 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Dpysl3Q62188 570 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Frmd5Q6P5H6 517 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Rad54bQ6PFE3 886 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Lrrc27Q80YS5 523 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Washc5Q8C2E7 1159 aaKnown RBP11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Snx8Q8CFD4 459 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Rab15Q8K386 212 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Hkdc1Q91W97 915 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Dctn2Q99KJ8 402 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Mms19Q9D071 1031 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Rin2Q9D684 903 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Cldn22Q9D7U6 220 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 MajinQ9D992 256 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Kmt2eQ3UG20 1868 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Vti1aO89116 217 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 ZfxP17012 799 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 TdgP56581 421 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Gata5P97489 404 aa11.78□□□□□ -0.52
Trim23-203ENSMUST00000069187 Ppm1jQ149T7 507 aa11.78□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms