RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Nr3c1P06537 783 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Oas1aP11928 367 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fmr1P35922 614 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Olfr119Q7TRJ5 321 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rsbn1Q80T69 795 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Q8BGC1 442 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Arhgap25Q8BYW1 648 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Oas1gQ8K469 367 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Thap11Q9JJD0 305 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 PnkpQ9JLV6 522 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Magi3Q9EQJ9 1476 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm5407E9Q7Q1 248 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pex5O09012 639 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gbx2P48031 348 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Dnal1Q05A62 190 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Senp7Q8BUH8 1037 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Hmg20aQ9DC33 346 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Slc4a5E9Q3M5 1116 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Hmox2O70252 315 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rrm1P07742 792 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 RorbQ8R1B8 470 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Extl2Q9ES89 330 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm5930D3Z257 264 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tnfaip8Q921Z5 198 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pdk3Q922H2 415 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 IscuQ9D7P6 168 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 2010005H15RikQ9D8D6 97 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 CltcQ68FD5 1675 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tlr8P58682 1032 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Zdhhc9P59268 364 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Hpcal1P62748 193 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rasip1Q3U0S6 961 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Adad1Q5SUE7 619 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 SvoplQ6PDF3 494 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mettl16Q9CQG2 553 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tspan3Q9QY33 253 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Bub1O08901 1058 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 AurkaP97477 395 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tmem35bQ3U0Y2 150 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rbm44Q3V089 1013 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tex24Q5DP50 351 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Lrig3Q6P1C6 1117 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ints6Q6PCM2 883 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 GmppbQ8BTZ7 360 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tmem79Q9D709 391 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Fxr2Q9WVR4 673 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rad21l1A2AU37 552 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ica1lQ3TY65 431 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Grm4Q68EF4 912 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Lrrc24Q8BHA1 521 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 CenpxQ8C4X1 78 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sugp1Q8CH02 643 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Cdc42ep4Q9JM96 349 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rps6ka4Q9Z2B9 773 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 PhgdhQ61753 533 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 DcakdQ8BHC4 231 aaKnown RBP12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Pi4kbQ8BKC8 816 aa12.26□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nedd8P29595 81 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Traf3Q60803 567 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Vsx2Q61412 361 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Clca4aQ6Q473 924 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Lrrc1Q80VQ1 524 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm7145A0A087WS64 360 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm44511A0A0N4SW10 223 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm10406A6NAS4 205 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm3373A6NAS7 205 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Zbed5B2RPU8 756 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm3298E9PW80 205 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 2610008E11RikG3X964 669 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm3667K7N757 205 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Bcat1P24288 386 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Gm3558Q5FWC9 205 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Klhl17Q6TDP3 640 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mov10l1Q99MV5 1187 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tnfaip8l2Q9D8Y7 184 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Hes6Q9JHE6 224 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Dnaja4Q9JMC3 397 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ssc5dQ8BV57 1371 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Krt28A6BLY7 462 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tekt5G5E8A8 557 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 ProcP33587 460 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 DbtP53395 482 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Celf6Q7TN33 460 aaKnown RBP12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tbc1d10bQ8BHL3 798 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Eif2b2Q99LD9 351 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Yaf2Q99LW6 179 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Olfr271-ps1A0A1L1SQH2 283 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tbkbp1A2A9T0 611 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 GclcP97494 637 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Sel1l2Q3V172 688 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Mief2Q5NCS9 454 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Ifi47Q61635 420 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Nr6a1Q64249 495 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Rfx4Q7TNK1 735 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Spon2Q8BMS2 330 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Epc2Q8C0I4 808 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 WwoxQ91WL8 414 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Josd2Q9CR30 188 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Tssk3Q9D2E1 268 aa12.25□□□□□ -0.45
Trim56-201ENSMUST00000054384 Abhd2Q9QXM0 425 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms