RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Kcnq3Q8K3F6 873 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Nipsnap3bQ9CQE1 247 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Tex28B1AYN9 409 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Lipo2D3YY49 398 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Gm10477F6SW83 55 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Slc16a2O70324 545 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 FAM120AQ6A0A9 1112 aaKnown RBP23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Frmd5Q6P5H6 517 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Myl12aQ6ZWQ9 172 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Tmx2Q9D710 295 aaKnown RBP23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Kcnh7Q9ER47 1195 aa23.8■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Prl2c1Q5SVL9 228 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Thoc5Q8BKT7 683 aaKnown RBP23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Fbxo38Q8BMI0 1194 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Zmym6Q8BS54 1249 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Q8CC96 669 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Olfr1467Q8VFW1 308 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 1700129C05RikQ9CQ77 218 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rec114Q9CWH4 259 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Fam45aQ9D8N2 357 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Racgap1Q9WVM1 628 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Surf2P09926 257 aaKnown RBP23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Serpina6Q06770 397 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Aars2Q14CH7 980 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Kctd3Q8BFX3 815 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Senp7Q8BUH8 1037 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Hs6st1Q9QYK5 411 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rreb1Q3UH06 1700 aaKnown RBP23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Dph1Q5NCQ5 438 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Alg3Q8K2A8 438 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Ciapin1Q8WTY4 309 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Gyg1Q9R062 333 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Mup6A2AV72 179 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Hmgb3O54879 200 aaKnown RBP23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rbp3P49194 1234 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Lcp1Q61233 627 aaKnown RBP23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Zfp512bQ6PHP4 879 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Mfn2Q80U63 757 aa23.79■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 GclmO09172 274 aaKnown RBP23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Cfap61Q8CEL2 1252 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 CerkQ8K4Q7 531 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Slc12a4Q9JIS8 1085 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Cdr2lA2A6T1 465 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Zbed6D2EAC2 980 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Gm3526E9PZM0 191 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 XntrpcF8VQM8 1264 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Scgb2b19J3QM75 112 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Ogfod1Q3U0K8 545 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rbm20Q3UQS8 1199 aaKnown RBP23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Znf496Q5SXI5 585 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rab36Q8CAM5 267 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Wrap53Q8VC51 532 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 MutyhQ99P21 515 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 MceeQ9D1I5 178 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Trpc2Q9R244 1172 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Mettl1Q9Z120 268 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Ttc37F8VPK0 1563 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Gm21964A0A1W2P7S4 437 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Psmc6P62334 389 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Hus1Q8BQY8 280 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Nckap1lQ8K1X4 1134 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Odc1P00860 461 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Kansl1lQ5DTI6 991 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 EregQ61521 162 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 OgtQ8CGY8 1046 aa23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 MtrexQ9CZU3 1040 aaKnown RBP23.78■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Srsf11E9Q6E5 511 aaKnown RBP23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Gja6Q6S5G4 283 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Cpne3Q8BT60 533 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Ifi205aQ8CGE8 404 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Mta3Q924K8 591 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Atp5f1Q9CQQ7 256 aaKnown RBP23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Grk1Q9WVL4 564 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 MetP16056 1379 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Mcpt1P11034 246 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Tubgcp5Q8BKN5 1024 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 IlkapQ8R0F6 392 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Ppp6r2Q8R3Q2 923 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Lsm7Q9CQQ8 103 aaKnown RBP23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Cyp2s1Q9DBX6 501 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Camk1dQ8BW96 385 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Tktl2Q9D4D4 627 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Cd19P25918 547 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Zbtb44Q8R0A2 453 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Etnk1Q9D4V0 363 aa23.77■■□□□ 1.4
Sh3rf1-201ENSMUST00000034060 Rnf113a2Q14B01 337 aa23.77■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Plcl2Q8K394 1128 aa23.77■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Wdr98Q8VC42 657 aa23.77■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Spata9Q9D9R3 252 aa23.77■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Vmn2r38G3UYA8 861 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Vmn2r33K7N705 861 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Vmn2r44L7N2E1 861 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Akt1P31750 480 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Tssk1bQ61241 365 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 GpamQ61586 827 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Armcx6Q8K3A6 301 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Tbc1d13Q8R3D1 400 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Stau1Q9Z108 487 aaKnown RBP23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 Unc13dB2RUP2 1085 aa23.76■■□□□ 1.39
Sh3rf1-201ENSMUST00000034060 MrasO08989 208 aa23.76■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms