RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Zfp512bQ6PHP4 879 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Smim11aQ99J19 55 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sgpp1Q9JI99 430 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Gm6465F7A7Y6 181 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pou2f3P31362 431 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Epb41P48193 858 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rab2aP53994 212 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 FaxcQ3UMF9 409 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tigd5Q499M4 642 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tcf12Q61286 706 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cdkn2aipQ8BI72 563 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ticam2Q8BJQ4 232 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pou5f2Q9DAC9 329 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cdhr2E9Q7P9 1308 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ccdc120A2AEV7 629 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 MndalD0QMC3 538 aaKnown RBP14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 CcnjlQ5SRT8 387 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ggt7Q99JP7 662 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 NwcQ9CQI4 244 aa14.33□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Uhrf1bp1B2KF50 1429 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Galnt4O08832 578 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rb1P13405 921 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cst8P32766 142 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ncf4P97369 339 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 RgmbQ7TQ33 436 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Fam49bQ921M7 324 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 1700123K08RikQ9D991 295 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Klra17Q9JMA4 273 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 MycP01108 439 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Lrrc4bP0C192 709 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Alox12P39655 663 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Q8CC96 669 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Mcfd2Q8K5B2 145 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pcdha9Q91Y11 979 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Gm21972J3QN38 98 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Grm1P97772 1199 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 KdsrQ6GV12 332 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Mtg1Q8R2R6 326 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Akr1c21Q91WR5 323 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ergic3Q9CQE7 383 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 SpastQ9QYY8 614 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 MyocO70624 490 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 AfpP02772 605 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 TecP24604 630 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Olfr121Q5CZY0 321 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cyp4x1Q6A152 507 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sytl2Q99N50 950 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Lrrc47Q505F5 581 aaKnown RBP14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Btbd10Q80X66 475 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Kbtbd2G3X9X1 623 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Ptch2O35595 1182 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 DgkaO88673 730 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sel1l2Q3V172 688 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Xlr3bQ6P205 226 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Nudt16Q6P3D0 195 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Lrrc1Q80VQ1 524 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Susd4Q8BH32 490 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Eva1bQ8K2Y3 164 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tsen15Q8R3W5 168 aa14.32□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Gm13078A2AGW8 474 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Grik3B1AS29 919 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rtn2O70622 471 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rbbp4Q60972 425 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Cyp3a11Q64459 504 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Plekha6Q7TQG1 1173 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Zmym6Q8BS54 1249 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Dnali1Q8BVN8 258 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 SntnQ8C9X1 147 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Gtf2h1Q9DBA9 547 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Mpp6Q9JLB0 553 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Phf2Q9WTU0 1096 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Atf6F6VAN0 656 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Chst3O88199 472 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Jak1P52332 1153 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Foxn1Q61575 648 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Olfr698Q7TRN4 311 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tyw1Q8BJM7 721 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Asb2Q8K0L0 634 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tmcc3Q8R310 477 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Tmed5Q9CXE7 229 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 IscuQ9D7P6 168 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Adgrb3Q80ZF8 1522 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rims2Q9EQZ7 1530 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 FanceB8JJD6 213 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Magee2Q52KG3 523 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Nr1d2Q60674 576 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Olfr832Q7TRG9 312 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pex26Q8BGI5 305 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rfwd3Q8CIK8 774 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 LrmdaQ9D9B4 229 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 4930579F01RikE9Q3L6 325 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Rgs5O08850 181 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 PrkcbP68404 671 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Naf1Q3UMQ8 489 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Znf879Q8BI99 563 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Sbno2Q7TNB8 1349 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Olfr521E9Q519 321 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pyroxd1Q3TMV7 498 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Khdrbs2Q9WU01 349 aa14.31□□□□□ -0.12
Col5a1-201ENSMUST00000028280 Pkd2l1A2A259 760 aa14.31□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms