RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Znf536Q8K083 1302 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zdbf2Q5SS00 2493 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lamp1P11438 406 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Fgfr2P21803 821 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Hoxd10P28359 340 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ttc39dQ0VF76 604 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Prmt9Q3U3W5 846 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Grb10Q60760 621 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Frmd4aQ8BIE6 1020 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mcoln2Q8K595 566 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Q91Z58 1206 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 St13Q99L47 371 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Nme5Q99MH5 211 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rassf7Q9DD19 359 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cacng4Q9JJV4 327 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ddx39bQ9Z1N5 428 aaKnown RBP11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slfn14V9GXG1 899 aa11.24□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pms2P54279 859 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Afg1lQ3V384 480 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Xlr3aQ60595 226 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Klhl14Q69ZK5 630 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Capn11Q6J756 714 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Psd2Q6P1I6 770 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Phactr3Q8BYK5 558 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Nkiras1Q8CEC5 192 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ca9Q8VHB5 437 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pcdh18Q8VHR0 1134 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Snrnp25Q8VIK1 123 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 GatbQ99JT1 557 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Arl8bQ9CQW2 186 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Igdcc4Q9EQS9 1252 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rgs17Q9QZB0 210 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cep290Q6A078 2472 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Slc16a6B1AT66 607 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pdia2D3Z6P0 527 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Usp46P62069 366 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tars2Q3UQ84 723 aaKnown RBP11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Als2clQ60I26 952 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Arhgap30Q640N3 1101 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Orai3Q6P8G8 290 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ip6k2Q80V72 448 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Eif4bQ8BGD9 611 aaKnown RBP11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Pi4kbQ8BKC8 816 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Wdr98Q8VC42 657 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Nuf2Q99P69 463 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Drc3Q9D5E4 523 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Myh7Q91Z83 1935 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ndst1Q3UHN9 882 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 B3gnt3Q5JCS9 372 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccnt2Q7TQK0 723 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Usp1Q8BJQ2 784 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rccd1Q8BTU7 377 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccdc68Q8BVC4 333 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ctu1Q99J10 420 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Lpin3Q99PI4 848 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tcirg1Q9JHF5 834 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ptpn4Q9WU22 926 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Spag17Q5S003 2320 aa11.23□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm36028A0A0U1RPM1 299 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zfp612A0A1D5RMC2 672 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ttc7bE9Q6P5 843 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cyp4f17G3UW78 524 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Nek2O35942 443 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Spag6Q3V0U9 509 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm13103Q4VAD2 491 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Krt32Q62168 407 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Six2Q62232 296 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Rps6kc1Q8BLK9 1056 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 RbakQ8BQC8 711 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Q8CIL4 281 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Znf426Q8R1D1 550 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccdc92Q8VDN4 314 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Cyp4f16Q99N17 524 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Znf354bQ9QXT9 601 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Arhgef37A1IGU4 676 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm4985A2ALC6 410 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zfp850J3QPC5 689 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zc3h15Q3TIV5 426 aaKnown RBP11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tespa1Q3U132 458 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Mettl17Q3U2U7 461 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 P3h1Q3V1T4 739 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Kctd8Q50H33 476 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Zfp120Q8BZW4 436 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Syt15Q8C6N3 418 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ugp2Q91ZJ5 508 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Dgcr8Q9EQM6 773 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Hic1Q9R1Y5 733 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ssxb9A2BI93 185 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr743L7N1Y2 311 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Hes2O54792 157 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 AmhP27106 555 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Anxa5P48036 319 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Epb41l4aP52963 686 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 DselQ0VBN2 1207 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gpsm3Q3U1Z5 159 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Gm8773Q3UQ24 132 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Tmcc1Q69ZZ6 649 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Olfr212Q7TS33 327 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 TufmQ8BFR5 452 aa11.22□□□□□ -0.61
Msh3-201ENSMUST00000022220 Ccdc151Q8BSN3 593 aa11.22□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms