RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 CLCNKBP51801 687 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 GPX6P59796 221 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 SF3A3Q12874 501 aaKnown RBP eCLIP18.6■□□□□ 0.571e-9■■■■□ 22.2
PHGDH-226ENST00000641756 SLC9A4Q6AI14 798 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 PAQR9Q6ZVX9 377 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 C10orf67Q8IYJ2 551 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 SENP8Q96LD8 212 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 WDR83Q9BRX9 315 aaKnown RBP18.6■□□□□ 0.57
PHGDH-226ENST00000641756 ZNF670Q9BS34 389 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 MED10Q9BTT4 135 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 DUSP16Q9BY84 665 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 SPC25Q9HBM1 224 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 UBN1Q9NPG3 1134 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.6■□□□□ 0.57
PHGDH-226ENST00000641756 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
PHGDH-226ENST00000641756 AP4E1Q9UPM8 1137 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 CLUHO75153 1309 aa18.6■□□□□ 0.57
PHGDH-226ENST00000641756 RBL1P28749 1068 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SSTR1P30872 391 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 MPP2Q14168 576 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 BBS9Q3SYG4 887 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 LRRC34Q8IZ02 419 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 DEFB106AQ8N104 65 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 CCDC33Q8N5R6 958 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 PYROXD1Q8WU10 500 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SEC16BQ96JE7 1060 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 KCTD15Q96SI1 283 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-226ENST00000641756 AGO3Q9H9G7 860 aaKnown RBP18.59■□□□□ 0.57
PHGDH-226ENST00000641756 USP29Q9HBJ7 922 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 CYLDQ9NQC7 956 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 DDX43Q9NXZ2 648 aaKnown RBP18.59■□□□□ 0.57
PHGDH-226ENST00000641756 TLL2Q9Y6L7 1015 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SCNN1AP37088 669 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 NDUFV1P49821 464 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SULT1E1P49888 294 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SCNN1GP51170 649 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 PRKCZQ05513 592 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 SERINC5Q86VE9 423 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 TAX1BP1Q86VP1 789 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 FBXO36Q8NEA4 188 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 DYDC1Q8WWB3 177 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 MAML1Q92585 1016 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 NCAPGQ9BPX3 1015 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 UPF3AQ9H1J1 476 aaKnown RBP18.59■□□□□ 0.57
PHGDH-226ENST00000641756 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
PHGDH-226ENST00000641756 CASTOR2A6NHX0 329 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 RASA4BC9J798 803 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 GABRDO14764 452 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 RASA4O43374 803 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 PIAS1O75925 651 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 THP07101 528 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 NPR3P17342 541 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 PITX1P78337 314 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-226ENST00000641756 IFT88Q13099 833 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 EFTUD2Q15029 972 aaKnown RBP eCLIP18.58■□□□□ 0.573e-6■■■■□ 23.9
PHGDH-226ENST00000641756 DPYSL2Q16555 572 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 EFHC1Q5JVL4 640 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 CLEC20AQ6ZU45 233 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 FAM131BQ86XD5 332 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 PYROXD2Q8N2H3 581 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 RNF169Q8NCN4 708 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 C3orf58Q8NDZ4 430 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 FAF2Q96CS3 445 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 SLC38A7Q9NVC3 462 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 MTMR10Q9NXD2 777 aa18.58■□□□□ 0.57
PHGDH-226ENST00000641756 SYNJ2BP-COX16A0A087WUM0 186 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 ARL5CA6NH57 179 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 SEPT4O43236 478 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 ZBED1O96006 694 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 ASGR1P07306 291 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 THPOP40225 353 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 MAP3K7CLP57077 242 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 SLC8A3P57103 927 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 RNASELQ05823 741 aaKnown RBP18.58■□□□□ 0.56
PHGDH-226ENST00000641756 CACNB2Q08289 660 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-226ENST00000641756 MGAT3Q09327 533 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 FAXCQ5TGI0 409 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 AGMOQ6ZNB7 445 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 MICALCLQ6ZW33 695 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 PAXIP1Q6ZW49 1069 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-226ENST00000641756 ARCQ7LC44 396 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 SPATS2Q86XZ4 545 aaKnown RBP18.58■□□□□ 0.56
PHGDH-226ENST00000641756 RIBC1Q8N443 379 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-226ENST00000641756 GDAP1Q8TB36 358 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 PAAF1Q9BRP4 392 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 CRTAC1Q9NQ79 661 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 COX16Q9P0S2 106 aa18.58■□□□□ 0.56
PHGDH-226ENST00000641756 E7ESA3 106 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 VIMP08670 466 aaKnown RBP18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CCND3P30281 292 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CD52P31358 61 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 MATKP42679 507 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 TM4SF4P48230 202 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 CAP1Q01518 475 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 GBE1Q04446 702 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 PKN2Q16513 984 aaKnown RBP18.57■□□□□ 0.56
PHGDH-226ENST00000641756 DCAF6Q58WW2 860 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 DSTYKQ6XUX3 929 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 TADA2BQ86TJ2 420 aa18.57■□□□□ 0.56
PHGDH-226ENST00000641756 HACE1Q8IYU2 909 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms