RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 PDZD8Q8NEN9 1154 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 SLC35G2Q8TBE7 412 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 CTNNBL1Q8WYA6 563 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 NDRG1Q92597 394 aaKnown RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 CENPIQ92674 756 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 ZNF653Q96CK0 615 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 PABPC5Q96DU9 382 aaKnown RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 DDX23Q9BUQ8 820 aaKnown RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 ADAM33Q9BZ11 813 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 SFXN1Q9H9B4 322 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 LUC7LQ9NQ29 371 aaKnown RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 ST7Q9NRC1 585 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 DNMT3BQ9UBC3 853 aaKnown RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 UXTQ9UBK9 157 aaPredicted RBP9.56□□□□□ -0.88
SCARB2-225ENST00000640900 TFR2Q9UP52 801 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 ZKSCAN5Q9Y2L8 839 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 SCINQ9Y6U3 715 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 DUSP10Q9Y6W6 482 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 C5orf42Q9H799 3197 aa9.56□□□□□ -0.88
SCARB2-225ENST00000640900 OBSL1O75147 1896 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CCDC195A0A1B0GUA6 201 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 A0A1W2PQH9 124 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 PIK3R2O00459 728 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CCL16O15467 120 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 XYLBO75191 536 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 DAB1O75553 588 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CSPG5O95196 566 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 IPO7O95373 1038 aaKnown RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 FGF19O95750 216 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 OAS1P00973 400 aaKnown RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 LRG1P02750 347 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 LTFP02788 710 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 KRT3P12035 628 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 PTPN2P17706 415 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ABCB4P21439 1286 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 WEE1P30291 646 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CA8P35219 290 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 FLT3P36888 993 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CCR2P41597 374 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 MATKP42679 507 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 PTPN9P43378 593 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 OGDHQ02218 1023 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 DLX2Q07687 328 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 OR6B2Q6IFH4 312 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 DNAJC24Q6P3W2 148 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 Q7L0L9 218 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 SLFN11Q7Z7L1 901 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 RHOT2Q8IXI1 618 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ARHGAP18Q8N392 663 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 TXLNBQ8N3L3 684 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 RNF10Q8N5U6 811 aaKnown RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ARFGAP1Q8N6T3 406 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 LRRC57Q8N9N7 239 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 JOSD2Q8TAC2 188 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 FBXO32Q969P5 355 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 PGAP3Q96FM1 320 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ZNF512Q96ME7 567 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 NPY6RQ99463 290 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 TRIM62Q9BVG3 475 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 TSGA10Q9BZW7 698 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 TRIM7Q9C029 511 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ADAM7Q9H2U9 754 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 POPDC2Q9HBU9 364 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 MRPL47Q9HD33 250 aaKnown RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 OSGEPQ9NPF4 335 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 ABCC13Q9NSE7 274 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 RRN3Q9NYV6 651 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 GMIPQ9P107 970 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 CHORDC1Q9UHD1 332 aaPredicted RBP9.55□□□□□ -0.88
SCARB2-225ENST00000640900 COL6A3P12111 3177 aa9.55□□□□□ -0.88
SCARB2-225ENST00000640900 C2orf16Q68DN1 1984 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 USP27XA6NNY8 438 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 GJB6O95452 261 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 RHOP08100 348 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 MAN1A1P33908 653 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 NOS2P35228 1153 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 DEKP35659 375 aaKnown RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 ZNF143P52747 638 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 ITIH3Q06033 890 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 KIF5AQ12840 1032 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 NNTQ13423 1086 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 CCDC14Q49A88 953 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 PABPC1LQ4VXU2 614 aaKnown RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 ARTNQ5T4W7 220 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 FAM102AQ5T9C2 384 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SYPL2Q5VXT5 272 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 MICALL1Q8N3F8 863 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 DEFB123Q8N688 67 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 C12orf76Q8N812 135 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SMRP1Q8NCR6 262 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 TPCN2Q8NHX9 752 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SHKBP1Q8TBC3 707 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
SCARB2-225ENST00000640900 UBE2Q2Q8WVN8 375 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 MYLIPQ8WY64 445 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SUSD6Q92537 303 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 SLITRK1Q96PX8 696 aa9.54□□□□□ -0.88
SCARB2-225ENST00000640900 GAS2L1Q99501 681 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms