RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 JADE1Q6IE81 842 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 FAM183BPQ6ZVS7 135 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 SEPT1Q8WYJ6 367 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 LHX5Q9H2C1 402 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 ARHGEF4Q9NR80 690 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 CNTN3Q9P232 1028 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 E2F8A0AVK6 867 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 MEI4A8MW99 385 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 GPR25O00155 361 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 TTC39BQ5VTQ0 682 aaPredicted RBP17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 FAM160B1Q5W0V3 765 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 LRRC74BQ6ZQY2 392 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 CYP4V2Q6ZWL3 525 aaPredicted RBP17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 CHSY1Q86X52 802 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 RBM15BQ8NDT2 890 aaKnown RBP17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 FNIP1Q8TF40 1166 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 TMEM176AQ96HP8 235 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 CDT1Q9H211 546 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 PLAC1Q9HBJ0 212 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 USP29Q9HBJ7 922 aa17.19■□□□□ 0.34
HNRNPU-228ENST00000640306 NOP56O00567 594 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 PGK2P07205 417 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 GPD1P21695 349 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 GPD2P43304 727 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 BCAR1P56945 870 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 CRADDP78560 199 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 TREML2Q5T2D2 321 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 DCAF15Q66K64 600 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 NDUFAF2Q8N183 169 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 PLD5Q8N7P1 536 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 COPS5Q92905 334 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 E2F7Q96AV8 911 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 CPB2Q96IY4 423 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 MMP19Q99542 508 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 EBF4Q9BQW3 602 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 THTPAQ9BU02 230 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 PIDD1Q9HB75 910 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 SNRPAP09012 282 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 RARBP10826 455 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 CYP3A5P20815 502 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 OSBPP22059 807 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 STIP1P31948 543 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 UBAP2LQ14157 1087 aaKnown RBP17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 RNF220Q5VTB9 566 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 IER5Q5VY09 327 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 C16orf46Q6P387 395 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 SHCBP1LQ9BZQ2 653 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 POPDC2Q9HBU9 364 aa17.18■□□□□ 0.34
HNRNPU-228ENST00000640306 DCAF8L1A6NGE4 600 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 KRT37O76014 449 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 LMNAP02545 664 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ACADSP16219 412 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ICAM3P32942 547 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 GMPRP36959 345 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 KBTBD2Q8IY47 623 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 RNF157Q96PX1 679 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 TTC1Q99614 292 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 HOXC10Q9NYD6 342 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 BTBD7Q9P203 1132 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 PLLPQ9Y342 182 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 LTBP3Q9NS15 1303 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 BAG2O95816 211 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 TFE3P19532 575 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ZNF143P52747 638 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 SLC34A1Q06495 639 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 BSPRYQ5W0U4 402 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 CFAP61Q8NHU2 1237 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 MCRS1Q96EZ8 462 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 DDX50Q9BQ39 737 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 MIS12Q9H081 205 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 WDR35Q9P2L0 1181 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 HNRNPCL1O60812 293 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 SMIM24O75264 130 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 LYPLA1O75608 230 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 RFPL1O75677 317 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 USP1O94782 785 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 C1QAP02745 245 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 RPS12P25398 132 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 NDST1P52848 882 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 UNC5AQ6ZN44 842 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 LPIN3Q9BQK8 851 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 B3GNT5Q9BYG0 378 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 FRMD8P1Q9BZ68 369 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 FAM49BQ9NUQ9 324 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ETNK2Q9NVF9 386 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
HNRNPU-228ENST00000640306 ZBTB42B2RXF5 422 aa17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 LIN7AO14910 233 aaPredicted RBP17.16■□□□□ 0.34
HNRNPU-228ENST00000640306 B4GALT4O60513 344 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms