RNA–Protein interactions for RNA: ENST00000639525.1

SPIN3-223, Transcript of spindlin family member 3, human

TSL 5 BASIC

Gene SPIN3, Length 3,958 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-223	ENST00000639525	HABP4	Q5JVS0	413 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	RNASEH2B	Q5TBB1	312 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	PDZD4	Q76G19	769 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	APOPT1	Q96IL0	206 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	ACSS3	Q9H6R3	686 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	HMGXB4	Q9UGU5	601 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	TSR3	Q9UJK0	312 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	CYTH1	Q15438	398 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	SLC45A4	Q5BKX6	768 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	BEST2	Q8NFU1	509 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	LPIN3	Q9BQK8	851 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	ZNF518B	Q9C0D4	1074 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	GRID1	Q9ULK0	1009 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	AP4E1	Q9UPM8	1137 aa		12.19	□□□□□ -0.46
SPIN3-223	ENST00000639525	NPM3	O75607	178 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	ERVK-10	P10266	1014 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	MGAT1	P26572	445 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	ATXN1	P54253	815 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	ZNF772	Q68DY9	489 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	BBS12	Q6ZW61	710 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SLC7A14	Q8TBB6	771 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SYT11	Q9BT88	431 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	TXLNGY	Q9BZA5	131 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	TASP1	Q9H6P5	420 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SNTG2	Q9NY99	539 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SLC17A6	Q9P2U8	582 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SMCHD1	A6NHR9	2005 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525		M0QYT0	321 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	DFFA	O00273	331 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	TM9SF1	O15321	606 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	DYNC1LI2	O43237	492 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	PROC	P04070	461 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	ITGAV	P06756	1048 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	FKBP1A	P62942	108 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	CDK16	Q00536	496 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	PEX6	Q13608	980 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	METTL7B	Q6UX53	244 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	FAM183BP	Q6ZVS7	135 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	KIAA0319L	Q8IZA0	1049 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	TNS4	Q8IZW8	715 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	AFG1L	Q8WV93	481 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	HDAC11	Q96DB2	347 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SERAC1	Q96JX3	654 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	LGMN	Q99538	433 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	SPATC1L	Q9H0A9	340 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	DCX	O43602	365 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	VDR	P11473	427 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	MRPS35	P82673	323 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	DBN1	Q16643	649 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	LRRC74B	Q6ZQY2	392 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	ACO2	Q99798	780 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	CDT1	Q9H211	546 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	C20orf96	Q9NUD7	363 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	PRMT7	Q9NVM4	692 aa	Predicted RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	RABGEF1	Q9UJ41	708 aa		12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	DRG1	Q9Y295	367 aa	Known RBP	12.18	□□□□□ -0.46
SPIN3-223	ENST00000639525	COL14A1	Q05707	1796 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	CCDC130	P13994	396 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	IVD	P26440	423 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	IREB2	P48200	963 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	PDCD2	Q16342	344 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	EFHC2	Q5JST6	749 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	TAS1R3	Q7RTX0	852 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	UNC5B	Q8IZJ1	945 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ST13P4	Q8IZP2	240 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	COLGALT1	Q8NBJ5	622 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ST6GALNAC4	Q9H4F1	302 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	XAB2	Q9HCS7	855 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ARHGEF3	Q9NR81	526 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	PDGFC	Q9NRA1	345 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ERAP1	Q9NZ08	941 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	NOD1	Q9Y239	953 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	MYO18A	Q92614	2054 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	UBR2	Q8IWV8	1755 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	SPATA31C2	B4DYI2	1134 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	HBP1	O60381	514 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	GNL1	P36915	607 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	CACNA2D1	P54289	1103 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ARPP19	P56211	112 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	GBE1	Q04446	702 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	MED21	Q13503	144 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	USP10	Q14694	798 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	TRMT10B	Q6PF06	316 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	DEFB107A	Q8IZN7	70 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	USP13	Q92995	863 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	OSMR	Q99650	979 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	SNRNP25	Q9BV90	132 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ZCWPW1	Q9H0M4	648 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	RNPEP	Q9H4A4	650 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	MAP3K20	Q9NYL2	800 aa	Known RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ACTL7B	Q9Y614	415 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	PRR5-ARHGAP8	B1AHC4	643 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ACKR2	O00590	384 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	NUDT2	P50583	147 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	ARHGAP8	P85298	464 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	PCSK7	Q16549	785 aa		12.17	□□□□□ -0.46
SPIN3-223	ENST00000639525	EMC10	Q5UCC4	262 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms