RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 HIC2Q96JB3 615 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PGLYRP2Q96PD5 576 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 ARL8BQ9NVJ2 186 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 GNL3LQ9NVN8 582 aaKnown RBP1.18□□□□□ -2.22
LMBR1-222ENST00000638959 TMEM248Q9NWD8 314 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 HESX1Q9UBX0 185 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PCDHA13Q9Y5I0 950 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 PTGDR2Q9Y5Y4 395 aa1.18□□□□□ -2.22
LMBR1-222ENST00000638959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 A0A1B0GVT2 93 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 A6NNC1 897 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 INAFM1C9JVW0 142 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 PPP1R12AO14974 1030 aaPredicted RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 USP12O75317 370 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 PMPCBO75439 489 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 GNAI2P04899 355 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 DNAH10OSP0CZ25 163 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 CHRNB1P11230 501 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 CYP2C19P33261 490 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 RBM6P78332 1123 aaKnown RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 PMP22Q01453 160 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 Q0VFX4 171 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 DLGAP5Q15398 846 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 CNGA3Q16281 694 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 KIF19Q2TAC6 998 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 SMTNL2Q2TAL5 461 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 ZDHHC20Q5W0Z9 365 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 CNNM4Q6P4Q7 775 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 CMIPQ8IY22 773 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 IZUMO1Q8IYV9 350 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 C7orf57Q8NEG2 295 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 BCAS4Q8TDM0 211 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 PIGKQ92643 395 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 FCRL5Q96RD9 977 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 SRPK1Q96SB4 655 aaKnown RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 SLC25A33Q9BSK2 321 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 DNAJC28Q9NX36 388 aa1.17□□□□□ -2.22
LMBR1-222ENST00000638959 SIDT1Q9NXL6 827 aaKnown RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 AGO2Q9UKV8 859 aaKnown RBP1.17□□□□□ -2.22
LMBR1-222ENST00000638959 hCG_1984214I3L0E3 225 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 RRHO14718 337 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 ASAP2O43150 1006 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 PRPF4O43172 522 aaKnown RBP eCLIP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 CSF1RP07333 972 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 HK3P52790 923 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 GYS2P54840 703 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 SESN3P58005 492 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 FMO1Q01740 532 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 GAD2Q05329 585 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 KRT72Q14CN4 511 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 IQCB1Q15051 598 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 ZNF497Q6ZNH5 498 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 Q6ZTK2 550 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 CTU1Q7Z7A3 348 aaKnown RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 SMIM29Q86T20 159 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 LRRTM3Q86VH5 581 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 P2RY8Q86VZ1 359 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 ABRAQ8N0Z2 381 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 IL17RCQ8NAC3 791 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 SLC43A3Q8NBI5 491 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 TMEM174Q8WUU8 243 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 INPP5DQ92835 1189 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 RSPRY1Q96DX4 576 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 MRGPRX4Q96LA9 322 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 MOV10L1Q9BXT6 1211 aaKnown RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 NUAK2Q9H093 628 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 ZSWIM4Q9H7M6 989 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 MLXIPLQ9NP71 852 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 IGSF5Q9NSI5 407 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 SIRT3Q9NTG7 399 aaPredicted RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 CCM2LQ9NUG4 571 aaPredicted RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 GAR1Q9NY12 217 aaKnown RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 KIAA1522Q9P206 1035 aaPredicted RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 FZD10Q9ULW2 581 aa1.16□□□□□ -2.22
LMBR1-222ENST00000638959 MRPS17Q9Y2R5 130 aaKnown RBP1.16□□□□□ -2.22
LMBR1-222ENST00000638959 SGTAO43765 313 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 ULK1O75385 1050 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 RFPL3O75679 317 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 PRKD3O94806 890 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 GLUD1P00367 558 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 AMD1P17707 334 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 RPS6KB1P23443 525 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 HOXD3P31249 432 aaPredicted RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 HOXA7P31268 230 aaPredicted RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 GLUD2P49448 558 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 FXR1P51114 621 aaKnown RBP eCLIP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 SCAND1P57086 179 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 CFHR3Q02985 330 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 DSC1Q08554 894 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 MTA1Q13330 715 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 KIF22Q14807 665 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 XKR6Q5GH73 641 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 C6orf10Q5SRN2 563 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 SLC4A10Q6U841 1118 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 ZNF771Q7L3S4 317 aaPredicted RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 TRMT1LQ7Z2T5 733 aaKnown RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 PNMA8AQ86V59 439 aaPredicted RBP1.15□□□□□ -2.23
LMBR1-222ENST00000638959 LMBR1Q8WVP7 490 aa1.15□□□□□ -2.23
LMBR1-222ENST00000638959 SCMH1Q96GD3 660 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms