RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CYP2F1P24903 491 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 RBL1P28749 1068 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 ITIH4Q14624 930 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 EFTUD2Q15029 972 aaKnown RBP eCLIP22.39■■□□□ 1.17
CLN6-224ENST00000638076 NUGGCQ68CJ6 796 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 ARCQ7LC44 396 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 B3GALNT2Q8NCR0 500 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 HSFY1Q96LI6 401 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 ZFP42Q96MM3 310 aa22.39■■□□□ 1.17
CLN6-224ENST00000638076 DHX35Q9H5Z1 703 aaKnown RBP22.39■■□□□ 1.17
CLN6-224ENST00000638076 ZBED1O96006 694 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 C6orf222P0C671 652 aaPredicted RBP22.38■■□□□ 1.17
CLN6-224ENST00000638076 L1CAMP32004 1257 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 KCNJ11Q14654 390 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 DPYSL2Q16555 572 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 SPRED3Q2MJR0 410 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 TOP6BLQ8N6T0 577 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 FBF1Q8TES7 1133 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 SOCS4Q8WXH5 440 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 MAGEB5Q9BZ81 275 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 NRDE2Q9H7Z3 1164 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 PAK5Q9P286 719 aa22.38■■□□□ 1.17
CLN6-224ENST00000638076 ATP2C2O75185 946 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 IGHA2P01877 340 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 AKR1A1P14550 325 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 WARSP23381 471 aaKnown RBP22.37■■□□□ 1.17
CLN6-224ENST00000638076 RASA2Q15283 850 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 TAF2Q6P1X5 1199 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 IFNL1Q8IU54 200 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 LRRN4Q8WUT4 740 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 CCT6BQ92526 530 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 SGSM3Q96HU1 749 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 TGS1Q96RS0 853 aaKnown RBP22.37■■□□□ 1.17
CLN6-224ENST00000638076 RAB6BQ9NRW1 208 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 AP4E1Q9UPM8 1137 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 CHMP2BQ9UQN3 213 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 CFAP69A5D8W1 941 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 SNX3O60493 162 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 PIAS1O75925 651 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 LRPAP1P30533 357 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 C4orf33Q8N1A6 199 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 RTP4Q96DX8 246 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 MAGEB18Q96M61 343 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 SMC6Q96SB8 1091 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 ACSS3Q9H6R3 686 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.37■■□□□ 1.17
CLN6-224ENST00000638076 SENP1Q9P0U3 644 aa22.37■■□□□ 1.17
CLN6-224ENST00000638076 BCLAF3A2AJT9 711 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 MEIS3P2A8K0S8 358 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 ZNF487B1APH4 448 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 XPO1O14980 1071 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 CHADO15335 359 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 ACAT1P24752 427 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 ACTN3Q08043 901 aaPredicted RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 PIGZQ86VD9 579 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 CCDC185Q8N715 623 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 PPP1R10Q96QC0 940 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 FETUBQ9UGM5 382 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 CYB561D2O14569 222 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 PRPF4O43172 522 aaKnown RBP eCLIP22.36■■□□□ 1.174e-7■■■■■ 28.6
CLN6-224ENST00000638076 IGFBP6P24592 240 aaPredicted RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 ELK3P41970 407 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 WDR4P57081 412 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 KLHL38Q2WGJ6 581 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 IGDCC3Q8IVU1 814 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 FUKQ8N0W3 1084 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 NDRG1Q92597 394 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 PAFAH2Q99487 392 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 HNRNPABQ99729 332 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 PAIP2Q9BPZ3 127 aaKnown RBP22.36■■□□□ 1.17
CLN6-224ENST00000638076 MTMR10Q9NXD2 777 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 CDY2AQ9Y6F7 541 aa22.36■■□□□ 1.17
CLN6-224ENST00000638076 A0A1W2PPM1 405 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 CCT8L1PA6NM43 557 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 M0QZ92 97 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 CLDN5O00501 218 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 MRPS6P82932 125 aaKnown RBP22.35■■□□□ 1.17
CLN6-224ENST00000638076 ADIGQ0VDE8 80 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 EFHC1Q5JVL4 640 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 WSCD1Q658N2 575 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 PACS2Q86VP3 889 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 TRPV1Q8NER1 839 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 FAM149B1Q96BN6 582 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 DUSP16Q9BY84 665 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 KDM4CQ9H3R0 1056 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 CACNG4Q9UBN1 327 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 DNM1LO00429 736 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 ATP2A2P16615 1042 aaKnown RBP22.35■■□□□ 1.17
CLN6-224ENST00000638076 IL9RQ01113 521 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 ZKSCAN8Q15776 578 aaPredicted RBP22.35■■□□□ 1.17
CLN6-224ENST00000638076 GNASQ5JWF2 1037 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 FAXCQ5TGI0 409 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 ADGRD1Q6QNK2 874 aa22.35■■□□□ 1.17
CLN6-224ENST00000638076 KCTD15Q96SI1 283 aaPredicted RBP22.35■■□□□ 1.17
CLN6-224ENST00000638076 ACTR5Q9H9F9 607 aaPredicted RBP22.35■■□□□ 1.17
CLN6-224ENST00000638076 H0YHG0 523 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 DUSP11O75319 330 aaKnown RBP22.34■■□□□ 1.17
CLN6-224ENST00000638076 AVILO75366 819 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 ASMTLO95671 621 aa22.34■■□□□ 1.17
CLN6-224ENST00000638076 OAS1P00973 400 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms