RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 SMC2O95347 1197 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ACO1P21399 889 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 HOXC13P31276 330 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 SLC6A11P48066 632 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 KIF11P52732 1056 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 SEC13P55735 322 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 SLC8A3P57103 927 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 UBE2HP62256 183 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ORC1Q13415 861 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 BYSLQ13895 437 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZNF658Q5TYW1 1059 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 CCDC186Q7Z3E2 898 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 BBS7Q8IWZ6 715 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ETFBKMTQ8IXQ9 262 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ELMO3Q96BJ8 720 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 XPO6Q96QU8 1125 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 MMRN2Q9H8L6 949 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 RAB20Q9NX57 234 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 CLIC5Q9NZA1 410 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 MARK1Q9P0L2 795 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 WDR35Q9P2L0 1181 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 STARD13Q9Y3M8 1113 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 ACACBO00763 2458 aa13.86□□□□□ -0.19
SYNGAP1-224ENST00000637721 NUP205Q92621 2012 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 HHLA1C9JL84 531 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 RALAP11233 206 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 CD58P19256 250 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 MPLP40238 635 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 KIR2DL1P43626 348 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 FKBP3Q00688 224 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 LRRC63Q05C16 580 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 ANO4Q32M45 955 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 IL31Q6EBC2 164 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 ARHGAP18Q8N392 663 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 IL17RCQ8NAC3 791 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 TXNDC5Q8NBS9 432 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 WHAMMQ8TF30 809 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 SPACA7Q96KW9 195 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 TIGD1Q96MW7 591 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 GBP4Q96PP9 640 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 KLF16Q9BXK1 252 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 DNMT3LQ9UJW3 386 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 USP3Q9Y6I4 520 aa13.85□□□□□ -0.19
SYNGAP1-224ENST00000637721 ABCA7Q8IZY2 2146 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 THADAQ6YHU6 1953 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 DCDC2BA2VCK2 349 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 TBC1D3BA6NDS4 549 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 CYP26A1O43174 497 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 TULP3O75386 442 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 RARGP13631 454 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 GBP1P32455 592 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PPP1R2P41236 205 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 DPP6P42658 865 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 YWHAEP62258 255 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PNOCQ13519 176 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 STIM1Q13586 685 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PPP1R26Q5T8A7 1209 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PMS2CLQ68D20 193 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 ARHGAP17Q68EM7 881 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 ANO7Q6IWH7 933 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 GPRIN1Q7Z2K8 1008 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 C12orf40Q86WS4 652 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 ZC3H3Q8IXZ2 948 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 ELOA2Q8IYF1 753 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PHTF2Q8N3S3 785 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 ALLCQ8N6M5 410 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 TERB1Q8NA31 727 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 OLIG1Q8TAK6 271 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 SPATA20Q8TB22 786 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 TMEM176AQ96HP8 235 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 HEXIM2Q96MH2 286 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 CISHQ9NSE2 258 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 POLR3BQ9NW08 1133 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 COQ4Q9Y3A0 265 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
SYNGAP1-224ENST00000637721 EPG5Q9HCE0 2579 aa13.83□□□□□ -0.19
SYNGAP1-224ENST00000637721 A0A1W2PQH9 124 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 SCAMP3O14828 347 aaKnown RBP13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 CACNG3O60359 315 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 GDF9O60383 454 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 GREM1O60565 184 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 KLF8O95600 359 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 TBX18O95935 607 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 ADRB1P08588 477 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 IRF1P10914 325 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 CHRM1P11229 460 aaPredicted RBP13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 TIE1P35590 1138 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 PRCPP42785 496 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 COG7P83436 770 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 KDSRQ06136 332 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 E2F5Q15329 346 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 GRAMD4Q6IC98 578 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 TMEM92Q6UXU6 159 aa13.83□□□□□ -0.2
SYNGAP1-224ENST00000637721 TMEM25Q86YD3 366 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms