RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 NFS1Q9Y697 457 aa22.59■■□□□ 1.21
CHRNA7-228ENST00000637519 DESP17661 470 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 PMS2P54278 862 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 DAOAP59103 153 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 P3H1Q32P28 736 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 CEP85LQ5SZL2 805 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 IZUMO3Q5VZ72 239 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 KCTD16Q68DU8 428 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 RHBDF2Q6PJF5 856 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 ARCQ7LC44 396 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 ABI1Q8IZP0 508 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 TAB3Q8N5C8 712 aaPredicted RBP22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 TEKT4Q8WW24 435 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 FAM193BQ96PV7 902 aaPredicted RBP22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 RNF157Q96PX1 679 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 MAK16Q9BXY0 300 aaKnown RBP22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 SEMA4AQ9H3S1 761 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 AP4E1Q9UPM8 1137 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 PCDHB7Q9Y5E2 793 aa22.58■■□□□ 1.21
CHRNA7-228ENST00000637519 PITPNM1O00562 1244 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 MDM4O15151 490 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 GBP1P32455 592 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 MNX1P50219 401 aaPredicted RBP22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 NME3Q13232 169 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 RAB41Q5JT25 222 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 ERMARDQ5T6L9 678 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 DEFB128Q7Z7B8 93 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 SH2D3CQ8N5H7 860 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 PQLC3Q8N755 202 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 CCDC89Q8N998 374 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 STKLD1Q8NE28 680 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 UHMK1Q8TAS1 419 aaKnown RBP22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 DIS3LQ8TF46 1054 aaKnown RBP22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 HIPK3Q9H422 1215 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 FAM204AQ9H8W3 233 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 PCDHB8Q9UN66 801 aa22.58■■□□□ 1.2
CHRNA7-228ENST00000637519 APOC4-APOC2K7ER74 178 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 APOC2P02655 101 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 ITIH2P19823 946 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 SLC25A52Q3SY17 297 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 TRIM60Q495X7 471 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 ANKRD20A8PQ5CZ79 823 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 BHLHA9Q7RTU4 235 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 ZC3H18Q86VM9 953 aaKnown RBP22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 GOLGA6L1Q8N7Z2 621 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 PCDH19Q8TAB3 1148 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 SPATA18Q8TC71 538 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 SEPT8Q92599 483 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 CASD1Q96PB1 797 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 KCTD15Q96SI1 283 aaPredicted RBP22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 NRDE2Q9H7Z3 1164 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 CSNK1G1Q9HCP0 422 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 MTMR10Q9NXD2 777 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 ANAPC5Q9UJX4 755 aa22.57■■□□□ 1.2
CHRNA7-228ENST00000637519 M0QYT0 321 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 SHBGP04278 402 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 ITGAVP06756 1048 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 CYP2C18P33260 490 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 EIF3EP60228 445 aaKnown RBP22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 ZNF844Q08AG5 666 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 IFRD2Q12894 506 aaPredicted RBP22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 GPS1Q13098 491 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 THEM5Q8N1Q8 247 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 CCDC33Q8N5R6 958 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 EDEM1Q92611 657 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 POPDC2Q9HBU9 364 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 TYMPP19971 482 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 L1CAMP32004 1257 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 TSPY1Q01534 308 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 FAAP100Q0VG06 881 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 MTMR3Q13615 1198 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 PDK2Q15119 407 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 STRADAQ7RTN6 431 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 UNC45BQ8IWX7 931 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 PLD5Q8N7P1 536 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 SLC2A13Q96QE2 648 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 NPY6RQ99463 290 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 PIGVQ9NUD9 493 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 DRG1Q9Y295 367 aaKnown RBP22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 HEY1Q9Y5J3 304 aa22.56■■□□□ 1.2
CHRNA7-228ENST00000637519 NT5C1B-RDH14C9J2C7 533 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 OPA1O60313 960 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 CYP2F1P24903 491 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 NOS2P35228 1153 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 LMNB2Q03252 620 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 SLC39A12Q504Y0 691 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 SLC39A5Q6ZMH5 540 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 CEP57Q86XR8 500 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 MAP7D3Q8IWC1 876 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 TTC13Q8NBP0 860 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 SCAMP5Q8TAC9 235 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 SLC7A14Q8TBB6 771 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 ADAM7Q9H2U9 754 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 CNGB3Q9NQW8 809 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 KANSL3Q9P2N6 904 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 LRFN2Q9ULH4 789 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 MFHAS1Q9Y4C4 1052 aa22.55■■□□□ 1.2
CHRNA7-228ENST00000637519 CAPN9O14815 690 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms