RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 CALN1Q9BXU9 219 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 HAPLN2Q9GZV7 340 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 POPDC2Q9HBU9 364 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 RAB6BQ9NRW1 208 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 MED7O43513 233 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 APOEP02649 317 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CD48P09326 243 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CNTFP26441 200 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 NAMPTP43490 491 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 BTKQ06187 659 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CES4AQ5XG92 561 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 NCAPG2Q86XI2 1143 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 JOSD2Q8TAC2 188 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 MAD1L1Q9Y6D9 718 aa15.36■□□□□ 0.05
CACNA1A-220ENST00000635988 CXorf49A8MYA2 514 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 CYB561D2O14569 222 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 CASQ2O14958 399 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 WDR46O15213 610 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 CCND2P30279 289 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 PSMC1P62191 440 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC25A3Q00325 362 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 PRKCEQ02156 737 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 CNTN2Q02246 1040 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 EMC2Q15006 297 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 PDK3Q15120 406 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 XKR3Q5GH77 459 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 TIFABQ6ZNK6 161 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 DGCR14Q96DF8 476 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 CMTM5Q96DZ9 223 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ZBTB45Q96K62 511 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 EBF4Q9BQW3 602 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 KLC2Q9H0B6 622 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ZNF395Q9H8N7 513 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 RAVER2Q9HCJ3 691 aaKnown RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 HOMER2Q9NSB8 354 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 AVILO75366 819 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ASNSP08243 561 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 MSLNQ13421 630 aaPredicted RBP15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 PTPN20Q4JDL3 420 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ZNF394Q53GI3 561 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC27A3Q5K4L6 730 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 RABGAP1LQ5R372 815 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 BRSK2Q8IWQ3 736 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ICA1LQ8NDH6 482 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 SMYD3Q9H7B4 428 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 NRDE2Q9H7Z3 1164 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC38A10Q9HBR0 1119 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 PTTG2Q9NZH5 202 aa15.35■□□□□ 0.05
CACNA1A-220ENST00000635988 ADGRA2Q96PE1 1338 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 SCN9AQ15858 1988 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 MEI4A8MW99 385 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 H7C0C1 242 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 TRUB2O95900 331 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 MIPP30301 263 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 MAGEA6P43360 314 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 ATP5OP48047 213 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 TGFB2P61812 414 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 CCNIQ14094 377 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 ZBTB41Q5SVQ8 909 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 C4orf22Q6V702 233 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 KIAA0319LQ8IZA0 1049 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 SLC4A11Q8NBS3 891 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 HSPH1Q92598 858 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 RTP4Q96DX8 246 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 C20orf27Q9GZN8 174 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 Q9H521 79 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 PCSK1NQ9UHG2 260 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 ADAMTS6Q9UKP5 1117 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 ARID2Q68CP9 1835 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 THSD7AQ9UPZ6 1657 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 AQP4P55087 323 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 TUBB3Q13509 450 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 LPCAT4Q643R3 524 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 VSIG10LQ86VR7 867 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 MCUQ8NE86 351 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 LZICQ8WZA0 190 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 LPAR1Q92633 364 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 GLIS2Q9BZE0 524 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 ASNSD1Q9NWL6 643 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 FBXO40Q9UH90 709 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 CDH22Q9UJ99 828 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.34■□□□□ 0.05
CACNA1A-220ENST00000635988 LRRIQ4A6NIV6 560 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 FAM189A1O60320 539 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 TOM1L1O75674 476 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ENDOD1O94919 500 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ATG7O95352 703 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ASLP04424 464 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ETS2P15036 469 aa15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 ACAT1P24752 427 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-220ENST00000635988 L1CAMP32004 1257 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms