RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 BRD9Q9H8M2 597 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 MCM9Q9NXL9 1143 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 WARS2Q9UGM6 360 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 CPQQ9Y646 472 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 TLR3O15455 904 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 SNAP91O60641 907 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 H6PDO95479 791 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 ASNSP08243 561 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 RARBP10826 455 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 ALAS1P13196 640 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 TATP17735 454 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 CHRNA3P32297 505 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 BTDP43251 543 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 RGS7P49802 495 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 BMXP51813 675 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 AP2S1P53680 142 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 RPP38P78345 283 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 SP140Q13342 867 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 TRIM25Q14258 630 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 TYSND1Q2T9J0 566 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 RNASEH2BQ5TBB1 312 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 SLFN13Q68D06 897 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 CCDC137Q6PK04 289 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 STXBP4Q6ZWJ1 553 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 ARMC8Q8IUR7 673 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 OR5H6Q8NGV6 325 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 SLC16A10Q8TF71 515 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 STAMQ92783 540 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 C18orf8Q96DM3 657 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 PHACTR3Q96KR7 559 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 CNOT6LQ96LI5 555 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 KLHL32Q96NJ5 620 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 CDCA7Q9BWT1 371 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 MROQ9BYG7 248 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 CCDC8Q9H0W5 538 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 TRIT1Q9H3H1 467 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 CXorf21Q9HAI6 301 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 ZFYVE28Q9HCC9 887 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 PFDN2Q9UHV9 154 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 SRPRBQ9Y5M8 271 aaKnown RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 HEMK1Q9Y5R4 338 aaPredicted RBP6.31□□□□□ -1.4
CHD2-221ENST00000635856 UNC13BO14795 1591 aa6.31□□□□□ -1.4
CHD2-221ENST00000635856 NEDD4P46934 1319 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 EXOC1LA0A1B0GW35 172 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 OR6C65A6NJZ3 312 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 FCHO1O14526 889 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 CRTAMO95727 393 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 EIF2AK2P19525 551 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 SHEQ5VZ18 495 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 TOM1L2Q6ZVM7 507 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 UTS2BQ765I0 119 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 GPR180Q86V85 440 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 ZNF354CQ86Y25 554 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 JAMLQ86YT9 394 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 DIS3L2Q8IYB7 885 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 SLC15A4Q8N697 577 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 PSD4Q8NDX1 1056 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 CSRNP1Q96S65 589 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 BTBD2Q9BX70 525 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 RBM38Q9H0Z9 239 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 CSRNP2Q9H175 543 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 TRABDQ9H4I3 376 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 SUCOQ9UBS9 1254 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 GNEQ9Y223 722 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 PTPN22Q9Y2R2 807 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 SLC45A1Q9Y2W3 748 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 SNX8Q9Y5X2 465 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 ZHX2Q9Y6X8 837 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 CDK12Q9NYV4 1490 aaPredicted RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 LRRC53A6NM62 1247 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 CAPN14A8MX76 684 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 PLK4O00444 970 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 BTN3A1O00481 513 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 PDE8AO60658 829 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 GH1P01241 217 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 KRT1P04264 644 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 RPN1P04843 607 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 APOA4P06727 396 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 PLEKP08567 350 aaPredicted RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 CYP21A2P08686 494 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 RPL9P32969 192 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 GDI2P50395 445 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 RAD23AP54725 363 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 TLR1Q15399 786 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 PDK4Q16654 411 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 EXOC3L4Q17RC7 722 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 EARS2Q5JPH6 523 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 ARSKQ6UWY0 536 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 TTC5Q8N0Z6 440 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 ZNF786Q8N393 782 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 GALNT11Q8NCW6 608 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 HM13Q8TCT9 377 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 C10orf82Q8WW14 230 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 INTS12Q96CB8 462 aaKnown RBP6.3□□□□□ -1.4
CHD2-221ENST00000635856 ZNF347Q96SE7 839 aa6.3□□□□□ -1.4
CHD2-221ENST00000635856 USB1Q9BQ65 265 aaKnown RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms