RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 MTF1Q14872 753 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 C10orf120Q5SQS8 335 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 BSPRYQ5W0U4 402 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CC2D1AQ6P1N0 951 aaPredicted RBP10.21□□□□□ -0.78
LINC00339-210ENST00000635675 HFE2Q6ZVN8 426 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CACNA2D4Q7Z3S7 1137 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 DDX42Q86XP3 938 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC00339-210ENST00000635675 ZNF677Q86XU0 584 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 PASD1Q8IV76 773 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CLEC4CQ8WTT0 213 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 SLC20A1Q8WUM9 679 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 OSCP1Q8WVF1 389 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 PBXIP1Q96AQ6 731 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CPXM1Q96SM3 734 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CDK5RAP1Q96SZ6 601 aaKnown RBP10.21□□□□□ -0.78
LINC00339-210ENST00000635675 KLF16Q9BXK1 252 aaPredicted RBP10.21□□□□□ -0.78
LINC00339-210ENST00000635675 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 TTYH3Q9C0H2 523 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 NACA2Q9H009 215 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 MIS12Q9H081 205 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 LINC00597Q9H2U6 94 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 GRPEL1Q9HAV7 217 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 HPS4Q9NQG7 708 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 ARHGEF3Q9NR81 526 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 HEBP1Q9NRV9 189 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 IFNKQ9P0W0 207 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 CFAP97Q9P2B7 532 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 MYO6Q9UM54 1294 aa10.21□□□□□ -0.78
LINC00339-210ENST00000635675 E2F8A0AVK6 867 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 E5RJQ4 531 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 MDM4O15151 490 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 PAPSS1O43252 624 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 GREM1O60565 184 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 MMEP08473 750 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 GLULP15104 373 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 STARD6P59095 220 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 CDR2Q01850 454 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 PRKCQQ04759 706 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TNK2Q07912 1038 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 PDGFRLQ15198 375 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 MLF2Q15773 248 aaPredicted RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 FIGNQ5HY92 759 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TAF3Q5VWG9 929 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 BTBD8Q5XKL5 378 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TRIM68Q6AZZ1 485 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 IRF2BP2Q7Z5L9 587 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TADA2BQ86TJ2 420 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TMEM35BQ8NCS4 154 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 C1orf131Q8NDD1 294 aaKnown RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TTC16Q8NEE8 873 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 WBP2Q969T9 261 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 NOX5Q96PH1 765 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 LRFN3Q9BTN0 628 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 DDX23Q9BUQ8 820 aaKnown RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 XPO4Q9C0E2 1151 aaKnown RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 PDCL3Q9H2J4 239 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 EBF3Q9H4W6 596 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 ABCC13Q9NSE7 274 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 DUS2Q9NX74 493 aaKnown RBP10.2□□□□□ -0.78
LINC00339-210ENST00000635675 GTSE1Q9NYZ3 720 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TJP2Q9UDY2 1190 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 WNT6Q9Y6F9 365 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 TICRRQ7Z2Z1 1910 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 F5P12259 2224 aa10.2□□□□□ -0.78
LINC00339-210ENST00000635675 OTOL1A6NHN0 477 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 SART1O43290 800 aaKnown RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 LSM8O95777 96 aaKnown RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 LTFP02788 710 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 CYP1A1P04798 512 aaPredicted RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 FYNP06241 537 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 ARSAP15289 507 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 DEKP35659 375 aaKnown RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 FMO1Q01740 532 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 ARID5AQ03989 594 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 EFEMP1Q12805 493 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 RUNX3Q13761 415 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 EML3Q32P44 896 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 ITPRIPL2Q3MIP1 535 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 PTPN20Q4JDL3 420 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 HTR3DQ70Z44 454 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 RSRC2Q7L4I2 434 aaKnown RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 BEND5Q7L4P6 421 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 MIB1Q86YT6 1006 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 ADGRG2Q8IZP9 1017 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 FBXL6Q8N531 539 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 CSGALNACT1Q8TDX6 532 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 EDEM1Q92611 657 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 SHDQ96IW2 340 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 NUP58Q9BVL2 599 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 TBC1D17Q9HA65 648 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 OLA1Q9NTK5 396 aaKnown RBP10.19□□□□□ -0.78
LINC00339-210ENST00000635675 MARCH2Q9P0N8 246 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 CEP83Q9Y592 693 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 COL4A3Q01955 1670 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 ZDBF2Q9HCK1 2354 aa10.19□□□□□ -0.78
LINC00339-210ENST00000635675 A0A1W2PQJ5 194 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 KANSL1LA0AUZ9 987 aa10.18□□□□□ -0.78
LINC00339-210ENST00000635675 LRRC53A6NM62 1247 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms