RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 RNASELQ05823 741 aaKnown RBP12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 KCNJ11Q14654 390 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 TTC31Q49AM3 519 aaPredicted RBP12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 EFHC2Q5JST6 749 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 NUGGCQ68CJ6 796 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 ARHGEF18Q6ZSZ5 1173 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 C3orf62Q6ZUJ4 267 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 SLC26A9Q7LBE3 791 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 LIMS2Q7Z4I7 341 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 ZDHHC17Q8IUH5 632 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 PDIK1LQ8N165 341 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 CCDC33Q8N5R6 958 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 ATP11CQ8NB49 1132 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 APPL2Q8NEU8 664 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 NDRG1Q92597 394 aaKnown RBP12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 ZFP42Q96MM3 310 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 ZNF560Q96MR9 790 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 TGS1Q96RS0 853 aaKnown RBP12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 TBCBQ99426 244 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 AP5M1Q9H0R1 490 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 CACNG4Q9UBN1 327 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.33
UBASH3A-209ENST00000635325 BRCA2P51587 3418 aa12.96□□□□□ -0.34
UBASH3A-209ENST00000635325 C17orf102A2RUQ5 167 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 MEIS3P2A8K0S8 358 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 RBL1P28749 1068 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 STX2P32856 288 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 MAP2K2P36507 400 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PTPN9P43378 593 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 RPL34P49207 117 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 TAF6P49848 677 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 GEMIN4P57678 1058 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 LILRA4P59901 499 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 NR1H3Q13133 447 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ITIH4Q14624 930 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 FSCN1Q16658 493 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 FAXCQ5TGI0 409 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.346e-7■■■■■ 48.6
UBASH3A-209ENST00000635325 ANKS4BQ8N8V4 417 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 CENPIQ92674 756 aaPredicted RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PHACTR1Q9C0D0 580 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 NSRP1Q9H0G5 558 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PSMC3IPQ9P2W1 217 aaPredicted RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 SLC24A2Q9UI40 661 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PDCD11Q14690 1871 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PTGESO14684 152 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 TGM2P21980 687 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 CYP2F1P24903 491 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 HOXC8P31273 242 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 L1CAMP32004 1257 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ELK3P41970 407 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 PURAQ00577 322 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 GBE1Q04446 702 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 CGB2Q6NT52 195 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 CCDC185Q8N715 623 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 DENND1AQ8TEH3 1009 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 FAF2Q96CS3 445 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ZNF670Q9BS34 389 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 DHX35Q9H5Z1 703 aaKnown RBP12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 ACSS3Q9H6R3 686 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 NRDE2Q9H7Z3 1164 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 YY1AP1Q9H869 796 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 RAB6BQ9NRW1 208 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 MTMR10Q9NXD2 777 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 GRID1Q9ULK0 1009 aa12.95□□□□□ -0.34
UBASH3A-209ENST00000635325 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 CLDN5O00501 218 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 CLGNO14967 610 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 HUS1O60921 280 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 TAC1P20366 129 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 RDXP35241 583 aaKnown RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 RPA3P35244 121 aaPredicted RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PNPLA4P41247 253 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 SCTRP47872 440 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 SNX16P57768 344 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 SLC10A2Q12908 348 aaPredicted RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 LACTB2Q53H82 288 aaPredicted RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 TWF2Q6IBS0 349 aaKnown RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PPP1R21Q6ZMI0 780 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PALM2Q8IXS6 379 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 B3GALNT2Q8NCR0 500 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 RTP4Q96DX8 246 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 MAGEB18Q96M61 343 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PAIP2Q9BPZ3 127 aaKnown RBP12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 DHRS4Q9BTZ2 278 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 ABCF3Q9NUQ8 709 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 MFHAS1Q9Y4C4 1052 aa12.94□□□□□ -0.34
UBASH3A-209ENST00000635325 PRPF4O43172 522 aaKnown RBP eCLIP12.93□□□□□ -0.34
UBASH3A-209ENST00000635325 BEST1O76090 585 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms