RNA–Protein interactions for RNA: ENST00000634348.1

SRSF4-208, Transcript of serine and arginine rich splicing factor 4, human

TSL 5

Gene SRSF4, Length 8,128 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRSF4-208	ENST00000634348	RPP38	P78345	283 aa	Known RBP	11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	CNTN1	Q12860	1018 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZCCHC8	Q6NZY4	707 aa	Known RBP	11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	PRMT9	Q6P2P2	845 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	UTP15	Q8TED0	518 aa	Known RBP	11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	AP3S1	Q92572	193 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	RAD54L	Q92698	747 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	SPATA33	Q96N06	139 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	RNF123	Q5XPI4	1314 aa		11.69	□□□□□ -0.54
SRSF4-208	ENST00000634348	RGSL1	A5PLK6	1076 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348		H3BMM5	538 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	BBOX1	O75936	387 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TFE3	P19532	575 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	NMT1	P30419	496 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SLC26A3	P40879	764 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SEC24C	P53992	1094 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	OTOA	Q7RTW8	1153 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	EGFL6	Q8IUX8	553 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	E2F7	Q96AV8	911 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	VPS33A	Q96AX1	596 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	COMMD8	Q9NX08	183 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	POLRMT	O00411	1230 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZBTB5	O15062	677 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CLU	P10909	449 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	PRKG2	Q13237	762 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	NECTIN1	Q15223	517 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	FAAH2	Q6GMR7	532 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CASP12	Q6UXS9	341 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	BRSK2	Q8IWQ3	736 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	FLAD1	Q8NFF5	587 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	S100A13	Q99584	98 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZNF184	Q99676	751 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	EPB41L1	Q9H4G0	881 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	LATS2	Q9NRM7	1088 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HEY2	Q9UBP5	337 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CLOCK	O15516	846 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CTSH	P09668	335 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	AKT1	P31749	480 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CHI3L2	Q15782	390 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SMTNL2	Q2TAL5	461 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CDKL3	Q8IVW4	592 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HS6ST3	Q8IZP7	471 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HDAC2	Q92769	488 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	PABPC5	Q96DU9	382 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	RNPC3	Q96LT9	517 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	STRBP	Q96SI9	672 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	DGCR6L	Q9BY27	220 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TRMT13	Q9NUP7	481 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	PCMTD2	Q9NV79	361 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	GRID1	Q9ULK0	1009 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZNF518A	Q6AHZ1	1483 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TNPO2	O14787	897 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CYP2E1	P05181	493 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	MAZ	P56270	477 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	PRKCQ	Q04759	706 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	FAM136A	Q96C01	138 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ITSN2	Q9NZM3	1697 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ABCA10	Q8WWZ4	1543 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	RAPGEF6	Q8TEU7	1601 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	C2orf71	A6NGG8	1288 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ATP6V1G1	O75348	118 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ENO2	P09104	434 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	PAICS	P22234	425 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SERPINB5	P36952	375 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	CAMK1	Q14012	370 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	BTBD8	Q5XKL5	378 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ZFP1	Q6P2D0	407 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SLC25A41	Q8N5S1	370 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	RAB6B	Q9NRW1	208 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SLC25A13	Q9UJS0	675 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	FAM220BP	B1ANY3	271 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HIST1H2AD	P20671	130 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	UGP2	Q16851	508 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SH3TC2	Q8TF17	1288 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HIST1H2AH	Q96KK5	128 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	HIST1H2AJ	Q99878	128 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	H2AFJ	Q9BTM1	129 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TJP2	Q9UDY2	1190 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ULK1	O75385	1050 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	MAP3K6	O95382	1288 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	KPNA1	P52294	538 aa	Predicted RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	GSTA3	Q16772	222 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	DALRD3	Q5D0E6	543 aa	Known RBP	11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	GPD1L	Q8N335	351 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	MYCBPAP	Q8TBZ2	947 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	SCFD2	Q8WU76	684 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	ITFG2	Q969R8	447 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	IRAK3	Q9Y616	596 aa		11.68	□□□□□ -0.54
SRSF4-208	ENST00000634348	TCEA3	O75764	348 aa		11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	ASNS	P08243	561 aa		11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	FSHR	P23945	695 aa		11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	MAPK10	P53779	464 aa		11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	TOP3A	Q13472	1001 aa	Predicted RBP	11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	TIGD7	Q6NT04	549 aa	Predicted RBP	11.67	□□□□□ -0.54
SRSF4-208	ENST00000634348	CAMKK1	Q8N5S9	505 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms