RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NOMO3P69849 1222 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 ARHGAP15Q53QZ3 475 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 TDRD12Q587J7 1177 aaKnown RBP19.6■□□□□ 0.73
PNKP-224ENST00000631020 TMEM35BQ8NCS4 154 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 SLC30A5Q8TAD4 765 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 CPA5Q8WXQ8 436 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 HSFY1Q96LI6 401 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 CPXM1Q96SM3 734 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 FOXQ1Q9C009 403 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 IL21Q9HBE4 155 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 TJP2Q9UDY2 1190 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 MRPS17Q9Y2R5 130 aaKnown RBP19.6■□□□□ 0.73
PNKP-224ENST00000631020 USP3Q9Y6I4 520 aa19.6■□□□□ 0.73
PNKP-224ENST00000631020 PATJQ8NI35 1801 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 F5P12259 2224 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 ZFHX2Q9C0A1 2572 aaPredicted RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 FAM92AA1XBS5 289 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 SOBPA7XYQ1 873 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 PIK3R2O00459 728 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 LSM8O95777 96 aaKnown RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 DCNP07585 359 aaKnown RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 GLULP15104 373 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 TKTL1P51854 596 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 FCHO2Q0JRZ9 810 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 IFRD2Q12894 506 aaPredicted RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 PDCLQ13371 301 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 TAF12Q16514 161 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 NAA35Q5VZE5 725 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 ZNF852Q6ZMS4 543 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 TMEM150AQ86TG1 271 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 TMEM110Q86TL2 294 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 TRMT2BQ96GJ1 504 aaKnown RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 GCNAQ96QF7 691 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 ATXN3LQ9H3M9 355 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 LTB4R2Q9NPC1 389 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 ZNHIT6Q9NWK9 470 aaKnown RBP19.59■□□□□ 0.73
PNKP-224ENST00000631020 TICRRQ7Z2Z1 1910 aa19.59■□□□□ 0.73
PNKP-224ENST00000631020 HEPACAM2A8MVW5 462 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 MAN2B1O00754 1011 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 NCAM2O15394 837 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 RTN3O95197 1032 aaPredicted RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 YWHAQP27348 245 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 EIF4A3P38919 411 aaKnown RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 VIPR2P41587 438 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 PGFP49763 221 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 CCDC173Q0VFZ6 552 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 GRM2Q14416 872 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 CLEC16AQ2KHT3 1053 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 TSR1Q2NL82 804 aaKnown RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 TRIM72Q6ZMU5 477 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 TPRG1Q6ZUI0 275 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 NDRG1Q92597 394 aaKnown RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 TRIM44Q96DX7 344 aaPredicted RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 PANX2Q96RD6 677 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 TASP1Q9H6P5 420 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 LRRC4Q9HBW1 653 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 ST7Q9NRC1 585 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 HEBP1Q9NRV9 189 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 SEPT11Q9NVA2 429 aaKnown RBP19.58■□□□□ 0.73
PNKP-224ENST00000631020 COMMD8Q9NX08 183 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 TAS2R14Q9NYV8 317 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 ADAMTS1Q9UHI8 967 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 CEP83Q9Y592 693 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 VPS13AQ96RL7 3174 aa19.58■□□□□ 0.73
PNKP-224ENST00000631020 OBSL1O75147 1896 aa19.58■□□□□ 0.72
PNKP-224ENST00000631020 ZNF263O14978 683 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 CHADO15335 359 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 F11P03951 625 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 LCP1P13796 627 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 DDX6P26196 483 aaKnown RBP eCLIP19.57■□□□□ 0.72
PNKP-224ENST00000631020 GDI1P31150 447 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 RPS9P46781 194 aaKnown RBP19.57■□□□□ 0.72
PNKP-224ENST00000631020 CDK17Q00537 523 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 ADIGQ0VDE8 80 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 TAF10Q12962 218 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 ASTE1Q2TB18 679 aaPredicted RBP19.57■□□□□ 0.72
PNKP-224ENST00000631020 PTPN20Q4JDL3 420 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 C1orf228Q6PIY5 440 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 ARID3BQ8IVW6 561 aaPredicted RBP19.57■□□□□ 0.72
PNKP-224ENST00000631020 C1orf210Q8IVY1 113 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 SCUBE3Q8IX30 993 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 CLDN23Q96B33 292 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 MSANTD3Q96H12 275 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 PPP1R13BQ96KQ4 1090 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 CACNA1IQ9P0X4 2223 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 COL4A3Q01955 1670 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 FANCMQ8IYD8 2048 aa19.57■□□□□ 0.72
PNKP-224ENST00000631020 ZNF638Q14966 1978 aaKnown RBP19.57■□□□□ 0.72
PNKP-224ENST00000631020 A0A087X0T9 212 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 FAM170BA6NMN3 283 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 E5RJQ4 531 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 ARNTLO00327 626 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 TADA3O75528 432 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 ERBB2P04626 1255 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 USP17L7P0C7H9 530 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 FAM228BP0C875 321 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 FECHP22830 423 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
PNKP-224ENST00000631020 UBXN2BQ14CS0 331 aa19.56■□□□□ 0.72
PNKP-224ENST00000631020 C2CD6Q53TS8 623 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms