RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TARSP26639 723 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 LSP1P33241 339 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 NPTX2P47972 431 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 LAMTOR4Q0VGL1 99 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ACOX1Q15067 660 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TOMM20Q15388 145 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 LUZP2Q86TE4 346 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SLC47A2Q86VL8 602 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SPACA7Q96KW9 195 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SETD4Q9NVD3 440 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 FOXN3O00409 490 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TIMM44O43615 452 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 GLRA3O75311 464 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ABCB1P08183 1280 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 PLD1Q13393 1074 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 GSTA3Q16772 222 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TFAP2DQ7Z6R9 452 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 XPO6Q96QU8 1125 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 KANSL3Q9P2N6 904 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 A0A087WZ62 844 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 NR5A2O00482 541 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 DSG3P32926 999 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 FEN1P39748 380 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TRIM71Q2Q1W2 868 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 FAM131BQ86XD5 332 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 CBWD2Q8IUF1 395 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ARID3BQ8IVW6 561 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 MRPL48Q96GC5 212 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 FDXACB1Q9BRP7 624 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 LRRC40Q9H9A6 602 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 NDOR1Q9UHB4 597 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TIMM13Q9Y5L4 95 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 MED24O75448 989 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ZNF682O95780 498 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TRAF7Q6Q0C0 670 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 COMMD2Q86X83 199 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SLC20A1Q8WUM9 679 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ZIM3Q96PE6 472 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 MFSD1Q9H3U5 465 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 AGRPO00253 132 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 EIF3HO15372 352 aaKnown RBP eCLIP12.1□□□□□ -0.477e-7■■■□□ 17.6
SHPRH-211ENST00000629427 SOX6P35712 828 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 TKTL1P51854 596 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ATG4AQ8WYN0 398 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 GPATCH2LQ9NWQ4 482 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 SEPT3Q9UH03 358 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 UNC13BO14795 1591 aa12.1□□□□□ -0.47
SHPRH-211ENST00000629427 ZW10O43264 779 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 AKAP5P24588 427 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ISCUQ9H1K1 167 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CAAP1Q9H8G2 361 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 TBC1D23Q9NUY8 699 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 AP4E1Q9UPM8 1137 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 DRG1Q9Y295 367 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 PDHXO00330 501 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 RANBP1P43487 201 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 NCF4Q15080 339 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 KBTBD12Q3ZCT8 623 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FAM171A1Q5VUB5 890 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 EDEM1Q92611 657 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 AGO4Q9HCK5 861 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SH3BP4Q9P0V3 963 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 RPLP2P05387 115 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CYP11B1P15538 503 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 OR1E1P30953 314 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 OVGP1Q12889 678 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CBWD3Q5JTY5 395 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CBWD5Q5RIA9 395 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ZDHHC15Q96MV8 337 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 OSBPL6Q9BZF3 934 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FBXO44Q9H4M3 255 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 HPS5Q9UPZ3 1129 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ERI2A8K979 691 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 ZNF23P17027 643 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 KLRK1P26718 216 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 CYLC2Q14093 348 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 FNDC3BQ53EP0 1204 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 NBPF12Q5TAG4 269 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 LRRC6Q86X45 466 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 SYN2Q92777 582 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 GFM2Q969S9 779 aaKnown RBP12.09□□□□□ -0.47
SHPRH-211ENST00000629427 H3BRB1 525 aa12.09□□□□□ -0.47
SHPRH-211ENST00000629427 GRK4P32298 578 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms