RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GOLGA8DPQ0D2H9 430 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 GPR158Q5T848 1215 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 VPS36Q86VN1 386 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 ARHGAP18Q8N392 663 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 DNASE1L2Q92874 299 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 PPP1R13BQ96KQ4 1090 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 LRRC3BQ96PB8 259 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 DNAJC7Q99615 494 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 SLC4A5Q9BY07 1137 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 MIS12Q9H081 205 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 TRPC7Q9HCX4 862 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 CNGB3Q9NQW8 809 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 TLR8Q9NR97 1041 aaKnown RBP15.45■□□□□ 0.06
PNKP-221ENST00000627317 ABHD10Q9NUJ1 306 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 ZMYM5Q9UJ78 669 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 USP3Q9Y6I4 520 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 USP34Q70CQ2 3546 aa15.45■□□□□ 0.06
PNKP-221ENST00000627317 FAM170AA1A519 330 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 GOLGA6L6A8MZA4 724 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 E5RJQ4 531 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 SART1O43290 800 aaKnown RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 PRAMEF12O95522 483 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 PTPN5P54829 565 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 ADKP55263 362 aaKnown RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 PFKPQ01813 784 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 FCHO2Q0JRZ9 810 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 GRM2Q14416 872 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 MLF2Q15773 248 aaPredicted RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 CLEC16AQ2KHT3 1053 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 PTPN20Q4JDL3 420 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 ZNF571Q7Z3V5 609 aaPredicted RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 MON1AQ86VX9 555 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 ARID3BQ8IVW6 561 aaPredicted RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 CCDC105Q8IYK2 499 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 ZNF687Q8N1G0 1237 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 WDTC1Q8N5D0 677 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 DEPDC1BQ8WUY9 529 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 CPA5Q8WXQ8 436 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 CPXM1Q96SM3 734 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 TASP1Q9H6P5 420 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 TRPV5Q9NQA5 729 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 CHORDC1Q9UHD1 332 aaPredicted RBP15.44■□□□□ 0.06
PNKP-221ENST00000627317 NAGPAQ9UK23 515 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 OBSL1O75147 1896 aa15.44■□□□□ 0.06
PNKP-221ENST00000627317 TRAV19A0A0A6YYK7 116 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 A0A1W2PQH9 124 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 ZNF840PA6NDX5 716 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 HEPACAM2A8MVW5 462 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 GABBR2O75899 941 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 CYP1A1P04798 512 aaPredicted RBP15.43■□□□□ 0.06
PNKP-221ENST00000627317 GLULP15104 373 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PSMC3P17980 439 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 HNRNPH3P31942 346 aaKnown RBP15.43■□□□□ 0.06
PNKP-221ENST00000627317 NSFP46459 744 aaKnown RBP15.43■□□□□ 0.06
PNKP-221ENST00000627317 RPL34P49207 117 aaKnown RBP15.43■□□□□ 0.06
PNKP-221ENST00000627317 PSEN1P49768 467 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 DAOAP59103 153 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PRKCQQ04759 706 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 SLC44A4Q53GD3 710 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 HGSNATQ68CP4 663 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 TXNDC8Q6A555 127 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PM20D1Q6GTS8 502 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 TMEM110Q86TL2 294 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 MFSD6LQ8IWD5 586 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 SCML4Q8N228 414 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 MAB21L3Q8N8X9 362 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PJA1Q8NG27 643 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 IRGQQ8WZA9 623 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PCDHB18PQ96TA0 734 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 SYT11Q9BT88 431 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 TRMT61BQ9BVS5 477 aaKnown RBP15.43■□□□□ 0.06
PNKP-221ENST00000627317 SLC46A2Q9BY10 475 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 FOXQ1Q9C009 403 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 NACA2Q9H009 215 aa15.43■□□□□ 0.06
PNKP-221ENST00000627317 PAPSS1O43252 624 aaPredicted RBP15.42■□□□□ 0.06
PNKP-221ENST00000627317 ERBB2P04626 1255 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 CKMP06732 381 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 ZDHHC11BP0C7U3 371 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 RALAP11233 206 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
PNKP-221ENST00000627317 MRE11P49959 708 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 YWHAGP61981 247 aaKnown RBP eCLIP15.42■□□□□ 0.06
PNKP-221ENST00000627317 ARID5BQ14865 1188 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 HECTD3Q5T447 861 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 OR6B2Q6IFH4 312 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 PPP1R2P3Q6NXS1 205 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 TOGARAM2Q6ZUX3 1019 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 SLC30A5Q8TAD4 765 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 CLEC4CQ8WTT0 213 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 NDRG1Q92597 394 aaKnown RBP15.42■□□□□ 0.06
PNKP-221ENST00000627317 E2F7Q96AV8 911 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 FAM149B1Q96BN6 582 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
PNKP-221ENST00000627317 DEF6Q9H4E7 631 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 OBP2AQ9NY56 170 aa15.42■□□□□ 0.06
PNKP-221ENST00000627317 IMPACTQ9P2X3 320 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms