RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 HOMER3Q9NSC5 361 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 RRN3Q9NYV6 651 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 MTRRQ9UBK8 725 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 PCSK1NQ9UHG2 260 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 USP3Q9Y6I4 520 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 VWA8A3KMH1 1905 aa7.31□□□□□ -1.24
CBWD3-219ENST00000622817 YJEFN3A6XGL0 299 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 E7ENQ6 273 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PI4K2BG5E9Z4 385 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 TNFRSF10BO14763 440 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CAPN9O14815 690 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 TJP3O95049 919 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RALAP11233 206 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CHRNA3P32297 505 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 GLUD2P49448 558 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SLC5A3P53794 718 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 DSG1Q02413 1049 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CDO1Q16878 200 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 DCAF6Q58WW2 860 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 TFDP3Q5H9I0 405 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SH3PXD2AQ5TCZ1 1133 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 TXNRD3NBQ6F5E7 133 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SLC8B1Q6J4K2 584 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SCYL2Q6P3W7 929 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PRSS55Q6UWB4 352 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RSPO2Q6UXX9 243 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SPOCD1Q6ZMY3 1216 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 BEND5Q7L4P6 421 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 ADAT2Q7Z6V5 191 aaKnown RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MAP7D3Q8IWC1 876 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 NUP93Q8N1F7 819 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 FIBCD1Q8N539 461 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 ATAD1Q8NBU5 361 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CCDC26Q8TAB7 109 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PHOSPHO2Q8TCD6 241 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 TEKT4Q8WW24 435 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HERVK_113Q902F9 699 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RAPGEF5Q92565 580 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 NT5C3BQ969T7 300 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RUNDC3BQ96NL0 473 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PGLYRP2Q96PD5 576 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 LRRC1Q9BTT6 524 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PARD6BQ9BYG5 372 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MTIF3Q9H2K0 278 aaKnown RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 FBXO44Q9H4M3 255 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 EFR3BQ9Y2G0 817 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 INSL6Q9Y581 213 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CDY1Q9Y6F8 540 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SLC4A7Q9Y6M7 1214 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PTPRDP23468 1912 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 NLRC5Q86WI3 1866 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MTMR11A4FU01 709 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 C3orf70A6NLC5 250 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PHF2O75151 1096 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 ENDOD1O94919 500 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RTN3O95197 1032 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 URODP06132 367 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RARAP10276 462 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HAPLN1P10915 354 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 KDELR1P24390 212 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 OR1D2P34982 312 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CDKN2BP42772 138 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SULT1E1P49888 294 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 EPHB4P54760 987 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HDAC4P56524 1084 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RPL10AP62906 217 aaKnown RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 KRT17Q04695 432 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PDK2Q15119 407 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CYP1B1Q16678 543 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 DDR2Q16832 855 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SMTNL2Q2TAL5 461 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 KCNT1Q5JUK3 1230 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 BSPRYQ5W0U4 402 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 WDR93Q6P2C0 686 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MFSD7Q6UXD7 560 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RNF19BQ6ZMZ0 732 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HFE2Q6ZVN8 426 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MAATS1Q7Z4T9 603 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HERC6Q8IVU3 1022 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 GPR65Q8IYL9 337 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PRELID2Q8N945 189 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 C12orf50Q8NA57 414 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HSPH1Q92598 858 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 MAGOHBQ96A72 148 aaKnown RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 SPATA17Q96L03 361 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 CEP295NLQ96MC4 621 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 PEBP4Q96S96 227 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 NPY6RQ99463 290 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 RAD9AQ99638 391 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 LBHD1Q9BQE6 289 aaPredicted RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 HEMGNQ9BXL5 484 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 DDX47Q9H0S4 455 aaKnown RBP7.3□□□□□ -1.24
CBWD3-219ENST00000622817 EPC1Q9H2F5 836 aa7.3□□□□□ -1.24
CBWD3-219ENST00000622817 KLHL11Q9NVR0 708 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms