RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TAS2R42Q7RTR8 314 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 GPR180Q86V85 440 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 HEATR4Q86WZ0 1026 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 TCP10LQ8TDR4 215 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 GRK7Q8WTQ7 553 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 NUDT12Q9BQG2 462 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 WWP1Q9H0M0 922 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 SAYSD1Q9NPB0 183 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 NDFIP2Q9NV92 336 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 LRP2BPQ9P2M1 347 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 IGSF9BQ9UPX0 1349 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
VPS11-209ENST00000622309 SPEF2Q9C093 1822 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ZSCAN5BA6NJL1 495 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CCNT2O60583 730 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 NOL3O60936 208 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 TMCC2O75069 709 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 PDE8BO95263 885 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ABHD2P08910 425 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ARL1P40616 181 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 TPTEP56180 551 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 INTS5Q6P9B9 1019 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 TMC5Q6UXY8 1006 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 SYDE1Q6ZW31 735 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 DGKHQ86XP1 1220 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ATP6V0D2Q8N8Y2 350 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TBC1D15Q8TC07 691 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TTC17Q96AE7 1141 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ARHGEF26Q96DR7 871 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 FAR2Q96K12 515 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 WRNIP1Q96S55 665 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 THAP2Q9H0W7 228 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 DNAJC18Q9H819 358 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CYP4F11Q9HBI6 524 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 EPB41L4AQ9HCS5 686 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 KCNK4Q9NYG8 393 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TBC1D14Q9P2M4 693 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 PSMD13Q9UNM6 376 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 UBR2Q8IWV8 1755 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CCDC85CA6NKD9 419 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 SYCE1LA8MT33 242 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 I3L4J1 428 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ALOX15BO15296 676 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 SORBS3O60504 671 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ICMTO60725 284 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 PAHP00439 452 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 HOXA7P31268 230 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 MAN1A1P33908 653 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 IL6STP40189 918 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 TECP42680 631 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CLK3P49761 638 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 BCAMP50895 628 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 BMXP51813 675 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TJAP1Q5JTD0 557 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TCHHL1Q5QJ38 904 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 LDLRAD1Q5T700 205 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TDRPQ86YL5 185 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 VGLL2Q8N8G2 317 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 EXD1Q8NHP7 514 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CDH19Q9H159 772 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 LRRC19Q9H756 370 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 LRRC4BQ9NT99 713 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 PSMC3IPQ9P2W1 217 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 NENFQ9UMX5 172 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 MYRFQ9Y2G1 1151 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 DNAJC16Q9Y2G8 782 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ANGPTL3Q9Y5C1 460 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TACC3Q9Y6A5 838 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 MYH11P35749 1972 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 RIC1Q4ADV7 1423 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 C1orf232A0A0U1RR37 186 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 GOLGA8RI6L899 631 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TM9SF1O15321 606 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 H6PDO95479 791 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 OR52Z1P0C646 297 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 KRT10P13645 584 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 DLG4P78352 724 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 SCARA3Q6AZY7 606 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 MILR1Q7Z6M3 343 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 CADM3Q8N126 398 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TERB1Q8NA31 727 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 LNX1Q8TBB1 728 aaPredicted RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 SHKBP1Q8TBC3 707 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 TRUB1Q8WWH5 349 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 AKT1S1Q96B36 256 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 WNT8AQ9H1J5 351 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 MOV10Q9HCE1 1003 aaKnown RBP8.19□□□□□ -1.1
VPS11-209ENST00000622309 SEPT3Q9UH03 358 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 AP4S1Q9Y587 144 aa8.19□□□□□ -1.1
VPS11-209ENST00000622309 ITGB4P16144 1822 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 TP73O15350 636 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 COMTP21964 271 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 SLC1A1P43005 524 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 BTDP43251 543 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 PEX3P56589 373 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 BNIP3Q12983 259 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 PTK6Q13882 451 aa8.18□□□□□ -1.1
VPS11-209ENST00000622309 DCAF17Q5H9S7 520 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms