RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 STK10O94804 968 aaKnown RBP16.37■□□□□ 0.21
NPHP4-211ENST00000622020 PDGFRAP16234 1089 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 RPL10AP62906 217 aaKnown RBP16.37■□□□□ 0.21
NPHP4-211ENST00000622020 CHSY1Q86X52 802 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 WDR49Q8IV35 697 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 AGR3Q8TD06 166 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 PDGFDQ9GZP0 370 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ITM2AO43736 263 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 PTPN7P35236 360 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ZRSR2Q15696 482 aaKnown RBP16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ARMC3Q5W041 872 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 LPCAT4Q643R3 524 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 DENND5BQ6ZUT9 1274 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 RAPH1Q70E73 1250 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 CRLF3Q8IUI8 442 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ASB3Q9Y575 518 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 IRF6O14896 467 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
NPHP4-211ENST00000622020 RFPL1O75677 317 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ZBED1O96006 694 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 TAP1Q03518 808 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 KCNJ11Q14654 390 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 VWA5B1Q5TIE3 1220 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 TRNP1Q6NT89 227 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 SLC26A7Q8TE54 656 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 RXFP2Q8WXD0 754 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 XYLT2Q9H1B5 865 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 ACSS2Q9NR19 701 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 NDE1Q9NXR1 346 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 PGAP2Q9UHJ9 254 aa16.37■□□□□ 0.21
NPHP4-211ENST00000622020 TGDSO95455 350 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 OSBPP22059 807 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CXCL9Q07325 125 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 KRT72Q14CN4 511 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CA9Q16790 459 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 C6orf163Q5TEZ5 329 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 FAM83AQ86UY5 434 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CAND1Q86VP6 1230 aaKnown RBP16.36■□□□□ 0.21
NPHP4-211ENST00000622020 ARHGAP24Q8N264 748 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 C12orf29Q8N999 325 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CEP41Q9BYV8 373 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 PLAC1Q9HBJ0 212 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MYOZ2Q9NPC6 264 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MAGED2Q9UNF1 606 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CAPN14A8MX76 684 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 SPATA31C2B4DYI2 1134 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MSCO60682 206 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MICAL2O94851 1124 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 ATG7O95352 703 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 RAB27AP51159 221 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 GHRHRQ02643 423 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CWF19L1Q69YN2 538 aaKnown RBP16.36■□□□□ 0.21
NPHP4-211ENST00000622020 ATXN7L3BQ96GX2 97 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 ZNF518BQ9C0D4 1074 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 EBF3Q9H4W6 596 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 WDR35Q9P2L0 1181 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 FETUBQ9UGM5 382 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 ZNF214Q9UL59 606 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MYO18AQ92614 2054 aaKnown RBP16.36■□□□□ 0.21
NPHP4-211ENST00000622020 CENPFP49454 3210 aa16.36■□□□□ 0.21
NPHP4-211ENST00000622020 MAGEA13PA6NCF6 341 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 MAFGO15525 162 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ITGB3P05106 788 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PRKCBP05771 671 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 LYNP07948 512 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PDE1BQ01064 536 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ZNF667Q5HYK9 610 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 SPDYAQ5MJ70 313 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 CMASQ8NFW8 434 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 GATA6Q92908 595 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PPP1R36Q96LQ0 422 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 RNF19AQ9NV58 838 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 MAP3K20Q9NYL2 800 aaKnown RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ZNF212Q9UDV6 495 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 TAGLN3Q9UI15 199 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 RPL26L1Q9UNX3 145 aaKnown RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 TXNDC9O14530 226 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 TNNC2P02585 160 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 NFICP08651 508 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 HOXC6P09630 235 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ADORA2AP29274 412 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 BCAR1P56945 870 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 STX3Q13277 289 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 TCHHL1Q5QJ38 904 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 PCYT2Q99447 389 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 MRPL4Q9BYD3 311 aaKnown RBP16.35■□□□□ 0.21
NPHP4-211ENST00000622020 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 WWP1Q9H0M0 922 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 RSAD1Q9HA92 442 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 USP29Q9HBJ7 922 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
NPHP4-211ENST00000622020 KCNK4Q9NYG8 393 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms