RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 APOL1O14791 398 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 RGS16O15492 202 aaPredicted RBP10.35□□□□□ -0.75
VTA1-205ENST00000620996 RIPK2O43353 540 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 PQBP1O60828 265 aaKnown RBP10.35□□□□□ -0.75
VTA1-205ENST00000620996 PAX7P23759 505 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 PCSK1P29120 753 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 RPL9P32969 192 aaKnown RBP10.35□□□□□ -0.75
VTA1-205ENST00000620996 ACTN2P35609 894 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 GRIK3Q13003 919 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 TUSC3Q13454 348 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 MAP3K21Q5TCX8 1036 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 ABI1Q8IZP0 508 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 TMEM86AQ8N2M4 240 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 CCDC185Q8N715 623 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 CMASQ8NFW8 434 aaPredicted RBP10.35□□□□□ -0.75
VTA1-205ENST00000620996 SLC7A14Q8TBB6 771 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 STK32AQ8WU08 396 aa10.35□□□□□ -0.75
VTA1-205ENST00000620996 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.35□□□□□ -0.75
VTA1-205ENST00000620996 F5H423 210 aaPredicted RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 H0YGN5 161 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PPP1R12AO14974 1030 aaPredicted RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 CREB3O43889 395 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CAND2O75155 1236 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 RARGP13631 454 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PITX1P78337 314 aaPredicted RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 LONRF1Q17RB8 773 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 OVOS1Q6IE37 1185 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 SLC26A9Q7LBE3 791 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CEP57Q86XR8 500 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 UNC45BQ8IWX7 931 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 SLAIN1Q8ND83 568 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 EDEM1Q92611 657 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 KHSRPQ92945 711 aaKnown RBP eCLIP10.34□□□□□ -0.753e-7■■■■□ 23.2
VTA1-205ENST00000620996 RBM15Q96T37 977 aaKnown RBP eCLIP10.34□□□□□ -0.75
VTA1-205ENST00000620996 FAM107BQ9H098 131 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PCDH18Q9HCL0 1135 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 TMPRSS4Q9NRS4 437 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 TPX2Q9ULW0 747 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 NFS1Q9Y697 457 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 APOC4-APOC2K7ER74 178 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 APOC2P02655 101 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 OR4Q2P0C623 313 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 SKIP12755 728 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CACNA2D1P54289 1103 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ARPP19P56211 112 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 YWHAZP63104 245 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 GUCY1A3Q02108 690 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CAV1Q03135 178 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CCDC38Q502W7 563 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ERMARDQ5T6L9 678 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 FBXW10Q5XX13 1052 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 HFE2Q6ZVN8 426 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PAQR9Q6ZVX9 377 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 MRPL10Q7Z7H8 261 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 PYROXD2Q8N2H3 581 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 URGCPQ8TCY9 931 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 TMEM209Q96SK2 561 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 NAALADL1Q9UQQ1 740 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 DPYSL4O14531 572 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 DNALI1O14645 258 aaPredicted RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 KCNN4O15554 427 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ITGAVP06756 1048 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 NCAM1P13591 858 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CYP2F1P24903 491 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 IVDP26440 423 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 KLRC2P26717 231 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PTPN7P35236 360 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CTCFP49711 727 aaPredicted RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 EIF3BP55884 814 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 MRPS5P82675 430 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 DEUP1Q05D60 604 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 DSC3Q14574 896 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 OASLQ15646 514 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 TRIM71Q2Q1W2 868 aaKnown RBP10.34□□□□□ -0.75
VTA1-205ENST00000620996 ANKRD20A8PQ5CZ79 823 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 GPRIN1Q7Z2K8 1008 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ZNF280BQ86YH2 543 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ANKMY2Q8IV38 441 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 SCN4BQ8IWT1 228 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 THEM5Q8N1Q8 247 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 RNF34Q969K3 372 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 RNF157Q96PX1 679 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 ADAM33Q9BZ11 813 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 VPS37BQ9H9H4 285 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 TBK1Q9UHD2 729 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 CDH9Q9ULB4 789 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 STAP1Q9ULZ2 295 aa10.34□□□□□ -0.75
VTA1-205ENST00000620996 GABRDO14764 452 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 RASGRF2O14827 1237 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 ZNF623O75123 536 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 BANF1O75531 89 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 ZBED1O96006 694 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 MATKP42679 507 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 TSPY1Q01534 308 aa10.33□□□□□ -0.76
VTA1-205ENST00000620996 MBTPS1Q14703 1052 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms