RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 EMC10Q5UCC4 262 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 HTR3DQ70Z44 454 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 CCDC186Q7Z3E2 898 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 PIGZQ86VD9 579 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 TTC30AQ86WT1 665 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 PHTF2Q8N3S3 785 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 GPR161Q8N6U8 529 aaKnown RBP18.07■□□□□ 0.48
HMGN3-203ENST00000620514 UBR7Q8N806 425 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 SPHK2Q9NRA0 654 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 CEP250Q9BV73 2442 aa18.07■□□□□ 0.48
HMGN3-203ENST00000620514 TULP2O00295 520 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 HOXC11O43248 304 aaPredicted RBP18.06■□□□□ 0.48
HMGN3-203ENST00000620514 APBB3O95704 486 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 APODP05090 189 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 EIF2DP41214 584 aaKnown RBP18.06■□□□□ 0.48
HMGN3-203ENST00000620514 PPP1R2P41236 205 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 RSPO4Q2I0M5 234 aaPredicted RBP18.06■□□□□ 0.48
HMGN3-203ENST00000620514 GOLGA7BQ2TAP0 167 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 ANO4Q32M45 955 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 C10orf120Q5SQS8 335 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 KBTBD6Q86V97 674 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 ETFBKMTQ8IXQ9 262 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 ANKRD52Q8NB46 1076 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 FAM124BQ9H5Z6 455 aaPredicted RBP18.06■□□□□ 0.48
HMGN3-203ENST00000620514 ZDHHC4Q9NPG8 344 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 DNMT3LQ9UJW3 386 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 EML5Q05BV3 1969 aa18.06■□□□□ 0.48
HMGN3-203ENST00000620514 DMXL1Q9Y485 3027 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 TRIM24O15164 1050 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 TULP3O75386 442 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 CCDC192P0DO97 292 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 HNRNPLP14866 589 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGN3-203ENST00000620514 CD19P15391 556 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 TIE1P35590 1138 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 RAB41Q5JT25 222 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 KLHDC10Q6PID8 442 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 MIB1Q86YT6 1006 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 ALLCQ8N6M5 410 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 CCDC26Q8TAB7 109 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 NDRG1Q92597 394 aaKnown RBP18.05■□□□□ 0.48
HMGN3-203ENST00000620514 KAT5Q92993 513 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 UBXN6Q9BZV1 441 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 TSPAN16Q9UKR8 245 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 MMP17Q9ULZ9 603 aa18.05■□□□□ 0.48
HMGN3-203ENST00000620514 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.05■□□□□ 0.48
HMGN3-203ENST00000620514 DCHS1Q96JQ0 3298 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 A0A0A0MRY4 1105 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 BICDL2A1A5D9 508 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 DCLK1O15075 740 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 KLF8O95600 359 aaPredicted RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 GRIA2P42262 883 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 KIR2DL1P43626 348 aaPredicted RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 PLA2G4AP47712 749 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 PSEN1P49768 467 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 DGKEP52429 567 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 YWHAEP62258 255 aaKnown RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 MRPS21P82921 87 aaKnown RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 PDE4CQ08493 712 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 PAK1Q13153 545 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 SGO2Q562F6 1265 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 BTBD8Q5XKL5 378 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 TMEM92Q6UXU6 159 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 TPGS1Q6ZTW0 290 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 CACNA2D4Q7Z3S7 1137 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 IL17RCQ8NAC3 791 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 TXNDC5Q8NBS9 432 aaKnown RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 TSTD1Q8NFU3 115 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 LMO3Q8TAP4 145 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 UBA3Q8TBC4 463 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 NT5C1BQ96P26 610 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 SEMA4GQ9NTN9 838 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 DLL3Q9NYJ7 618 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 CLIC5Q9NZA1 410 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 RASAL2Q9UJF2 1139 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 LSM7Q9UK45 103 aaKnown RBP18.04■□□□□ 0.48
HMGN3-203ENST00000620514 SDK1Q7Z5N4 2213 aa18.04■□□□□ 0.48
HMGN3-203ENST00000620514 SGK1O00141 431 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 PMM2O15305 246 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 STC2O76061 302 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 CALCAP01258 141 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 HMBSP08397 361 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 RALAP11233 206 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 VDRP11473 427 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 TBXAS1P24557 533 aaPredicted RBP18.03■□□□□ 0.48
HMGN3-203ENST00000620514 TKTL1P51854 596 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 LMNB2Q03252 620 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 GOLGA8FQ08AF8 430 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 GOLGA8DPQ0D2H9 430 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 EFEMP1Q12805 493 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 PUM1Q14671 1186 aaKnown RBP eCLIP18.03■□□□□ 0.48
HMGN3-203ENST00000620514 CAMK4Q16566 473 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 FOXR2Q6PJQ5 311 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 TMEM270Q6UE05 265 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 Q6ZNB5 142 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 BHLHA9Q7RTU4 235 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 ZNF276Q8N554 614 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 TFAP2BQ92481 460 aa18.03■□□□□ 0.48
HMGN3-203ENST00000620514 SRRTQ9BXP5 876 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms