RNA–Protein interactions for RNA: ENST00000619151.4

BRF1-221, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5 BASIC

Gene BRF1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-221ENST00000619151 PM20D1Q6GTS8 502 aa29.04■■■□□ 2.24
BRF1-221ENST00000619151 CCDC105Q8IYK2 499 aa29.04■■■□□ 2.24
BRF1-221ENST00000619151 ZNF558Q96NG5 402 aa29.04■■■□□ 2.24
BRF1-221ENST00000619151 PATJQ8NI35 1801 aa29.04■■■□□ 2.24
BRF1-221ENST00000619151 C3orf70A6NLC5 250 aaPredicted RBP29.03■■■□□ 2.24
BRF1-221ENST00000619151 TTI1O43156 1089 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 CPB1P15086 417 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 CYP2F1P24903 491 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 PBX3P40426 434 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 KRT81Q14533 505 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 CCNG2Q16589 344 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 TAZQ16635 292 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 USP41Q3LFD5 358 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 VSIG1Q86XK7 387 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 EIF1ADQ8N9N8 165 aaKnown RBP29.03■■■□□ 2.24
BRF1-221ENST00000619151 SP7Q8TDD2 431 aaPredicted RBP29.03■■■□□ 2.24
BRF1-221ENST00000619151 C2orf15Q8WU43 125 aaKnown RBP29.03■■■□□ 2.24
BRF1-221ENST00000619151 NDRG1Q92597 394 aaKnown RBP29.03■■■□□ 2.24
BRF1-221ENST00000619151 IGSF21Q96ID5 467 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 HERPUD2Q9BSE4 406 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 DCLK3Q9C098 648 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 STAU2Q9NUL3 570 aaKnown RBP eCLIP29.03■■■□□ 2.24
BRF1-221ENST00000619151 USP3Q9Y6I4 520 aa29.03■■■□□ 2.24
BRF1-221ENST00000619151 LAG3P18627 525 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 RABGGTBP53611 331 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 CUL1Q13616 776 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 BTG3Q14201 252 aaPredicted RBP29.02■■■□□ 2.24
BRF1-221ENST00000619151 TMEM173Q86WV6 379 aaPredicted RBP29.02■■■□□ 2.24
BRF1-221ENST00000619151 SCN4BQ8IWT1 228 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 TDHQ8IZJ6 230 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 SPPL2BQ8TCT7 592 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 NT5C3BQ969T7 300 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 C8orf48Q96LL4 319 aa29.02■■■□□ 2.24
BRF1-221ENST00000619151 FRMD8P1Q9BZ68 369 aaPredicted RBP29.02■■■□□ 2.24
BRF1-221ENST00000619151 YJEFN3A6XGL0 299 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 E7ENQ6 273 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 TLL1O43897 1013 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 KRT10P13645 584 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 RDXP35241 583 aaKnown RBP29.01■■■□□ 2.23
BRF1-221ENST00000619151 CDH6P55285 790 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 RTP2Q5QGT7 225 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 KCNT2Q6UVM3 1135 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 CYP4V2Q6ZWL3 525 aaPredicted RBP29.01■■■□□ 2.23
BRF1-221ENST00000619151 JAMLQ86YT9 394 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 TTC13Q8NBP0 860 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 BCL7CQ8WUZ0 217 aaPredicted RBP29.01■■■□□ 2.23
BRF1-221ENST00000619151 C1orf54Q8WWF1 131 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP29.01■■■□□ 2.232e-6■■■■■ 53.7
BRF1-221ENST00000619151 SLCO2A1Q92959 643 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 NPY6RQ99463 290 aa29.01■■■□□ 2.23
BRF1-221ENST00000619151 ENDOD1O94919 500 aa29■■■□□ 2.23
BRF1-221ENST00000619151 ECEL1O95672 775 aa29■■■□□ 2.23
BRF1-221ENST00000619151 SLC5A3P53794 718 aa29■■■□□ 2.23
BRF1-221ENST00000619151 GPR17Q13304 367 aa29■■■□□ 2.23
BRF1-221ENST00000619151 ERMARDQ5T6L9 678 aa29■■■□□ 2.23
BRF1-221ENST00000619151 SYDE1Q6ZW31 735 aaPredicted RBP29■■■□□ 2.23
BRF1-221ENST00000619151 BEND5Q7L4P6 421 aa29■■■□□ 2.23
BRF1-221ENST00000619151 ANKS1BQ7Z6G8 1248 aa29■■■□□ 2.23
BRF1-221ENST00000619151 B3GALT6Q96L58 329 aa29■■■□□ 2.23
BRF1-221ENST00000619151 SNRNP25Q9BV90 132 aaKnown RBP29■■■□□ 2.23
BRF1-221ENST00000619151 CALN1Q9BXU9 219 aa29■■■□□ 2.23
BRF1-221ENST00000619151 MAK16Q9BXY0 300 aaKnown RBP29■■■□□ 2.23
BRF1-221ENST00000619151 FAM114A2Q9NRY5 505 aa29■■■□□ 2.23
BRF1-221ENST00000619151 CHST7Q9NS84 486 aa29■■■□□ 2.23
BRF1-221ENST00000619151 ATP8B1O43520 1251 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 TBC1D4O60343 1298 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 BEND6Q5SZJ8 279 aaPredicted RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 FAM109BQ6ICB4 259 aaPredicted RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 TTC27Q6P3X3 843 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 HFE2Q6ZVN8 426 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 BBS12Q6ZW61 710 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 PSTKQ8IV42 348 aaKnown RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 TMEM169Q96HH4 297 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 PLEKHA4Q9H4M7 779 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 ZNF487B1APH4 448 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 EFEMP2O95967 443 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 NCAM1P13591 858 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 PTGIRP43119 386 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 LMNB2Q03252 620 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 TFDP2Q14188 446 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 RAB6CQ53S08 254 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 KIAA1841Q6NSI8 718 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 CHRDL2Q6WN34 429 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 BNIPLQ7Z465 357 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 RFX6Q8HWS3 928 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 RNF168Q8IYW5 571 aaPredicted RBP28.99■■■□□ 2.23
BRF1-221ENST00000619151 ATL2Q8NHH9 583 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 CASKIN2Q8WXE0 1202 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 PIK3R5Q8WYR1 880 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 RAB6CQ9H0N0 254 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 MTRRQ9UBK8 725 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 BACE2Q9Y5Z0 518 aa28.99■■■□□ 2.23
BRF1-221ENST00000619151 BHMG1C9JSJ3 638 aaPredicted RBP28.98■■■□□ 2.23
BRF1-221ENST00000619151 M0QYT0 321 aa28.98■■■□□ 2.23
BRF1-221ENST00000619151 TNFRSF10BO14763 440 aa28.98■■■□□ 2.23
BRF1-221ENST00000619151 GAS8O95995 478 aa28.98■■■□□ 2.23
BRF1-221ENST00000619151 TFE3P19532 575 aaPredicted RBP28.98■■■□□ 2.23
BRF1-221ENST00000619151 GBP1P32455 592 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms