RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 DERAQ9Y315 318 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 H0YHG0 523 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 ZBED1O96006 694 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 AKR1A1P14550 325 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 ATP5DP30049 168 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 ARL4CP56559 192 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 MAP3K7CLP57077 242 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 NOMO1Q15155 1222 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 FAM47EQ6ZV65 393 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 IGDCC3Q8IVU1 814 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 DEFB106AQ8N104 65 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 NAT8LQ8N9F0 302 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 WDR83Q9BRX9 315 aaKnown RBP12.92□□□□□ -0.34
CIITA-212ENST00000618207 CEP41Q9BYV8 373 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 MIOSQ9NXC5 875 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
CIITA-212ENST00000618207 CAPN7Q9Y6W3 813 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 CLUHO75153 1309 aa12.92□□□□□ -0.34
CIITA-212ENST00000618207 APRTP07741 180 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 AMPD1P23109 780 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 CYP2F1P24903 491 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 CLCNKBP51801 687 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 TFDP2Q14188 446 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 BOLA3Q53S33 107 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 MICALCLQ6ZW33 695 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 UNC93AQ86WB7 457 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 PDIK1LQ8N165 341 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 SGSM3Q96HU1 749 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
CIITA-212ENST00000618207 KATNAL1Q9BW62 490 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 RHOBTB2Q9BYZ6 727 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 ZFYVE28Q9HCC9 887 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 ABT1Q9ULW3 272 aaKnown RBP12.91□□□□□ -0.34
CIITA-212ENST00000618207 AP4E1Q9UPM8 1137 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 MRPL42Q9Y6G3 142 aaKnown RBP12.91□□□□□ -0.34
CIITA-212ENST00000618207 NUP205Q92621 2012 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 ALOX15BO15296 676 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 XPOTO43592 962 aaKnown RBP12.91□□□□□ -0.34
CIITA-212ENST00000618207 GNAT1P11488 350 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 AXLP30530 894 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 ELK3P41970 407 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 SCNN1GP51170 649 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
CIITA-212ENST00000618207 TAZQ16635 292 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 SV2CQ496J9 727 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 CCDC121Q6ZUS5 278 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 HFE2Q6ZVN8 426 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 FUKQ8N0W3 1084 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 TRIB2Q92519 343 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 USP6NLQ92738 828 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 KCNK16Q96T55 309 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
CIITA-212ENST00000618207 NKIRAS1Q9NYS0 192 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 INPP5FQ9Y2H2 1132 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 TTC3P53804 2025 aa12.91□□□□□ -0.34
CIITA-212ENST00000618207 CREB3O43889 395 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 POMCP01189 267 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 GOT1P17174 413 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 DESP17661 470 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 SULT1E1P49888 294 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 KIAA0319Q5VV43 1072 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 TADA2BQ86TJ2 420 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 SPOCK2Q92563 424 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 AGO3Q9H9G7 860 aaKnown RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 DDX43Q9NXZ2 648 aaKnown RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 WDR91A4D1P6 747 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 KIF1CO43896 1103 aaKnown RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 ENDOD1O94919 500 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 GHRP10912 638 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 FLT3LGP49771 235 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 SLC10A2Q12908 348 aaPredicted RBP12.9□□□□□ -0.34
CIITA-212ENST00000618207 FBXW10Q5XX13 1052 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 CRYBG2Q8N1P7 616 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 C3orf58Q8NDZ4 430 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 CENPTQ96BT3 561 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 TNIP3Q96KP6 325 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 SENP8Q96LD8 212 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 TRABDQ9H4I3 376 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 LRRC4Q9HBW1 653 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 UBN1Q9NPG3 1134 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 FAM105AQ9NUU6 356 aa12.9□□□□□ -0.34
CIITA-212ENST00000618207 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 THPOP40225 353 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 MAGEA9P43362 315 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 MRPS6P82932 125 aaKnown RBP12.89□□□□□ -0.35
CIITA-212ENST00000618207 SYPL2Q5VXT5 272 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 ARHGAP17Q68EM7 881 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 DSTYKQ6XUX3 929 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 PCGF5Q86SE9 256 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 MAML1Q92585 1016 aa12.89□□□□□ -0.35
CIITA-212ENST00000618207 TTC25Q96NG3 672 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms