RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CIPCQ9C0C6 399 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 TBC1D13Q9NVG8 400 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 MYH13Q9UKX3 1938 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 DLGAP3O95886 979 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 SERPINB5P36952 375 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF280DQ6N043 979 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 IGDCC4Q8TDY8 1250 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ELOVL6Q9H5J4 265 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 NCKAP1Q9Y2A7 1128 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 SLCO1B7G3V0H7 640 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 H3BMM5 538 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 RBP1P09455 135 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ELAVL2Q12926 359 aaKnown RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 GNA13Q14344 377 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 VPS72Q15906 364 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 FAM45AQ8TCE6 357 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 APBB2Q92870 758 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 GLMNQ92990 594 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 VPS33AQ96AX1 596 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 PTPN3P26045 913 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 LSP1P33241 339 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 DSG4Q86SJ6 1040 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 MAGEB10Q96LZ2 347 aaPredicted RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 LRRC40Q9H9A6 602 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 GGT7Q9UJ14 662 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 OGTO15294 1046 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF23P17027 643 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 NUP107P57740 925 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 R3HDM1Q15032 1099 aaKnown RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 NFE2Q16621 373 aaPredicted RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 GINS4Q9BRT9 223 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 SPRTNQ9H040 489 aaPredicted RBP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 AGPAT5Q9NUQ2 364 aa11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.57
CCDC144B-208ENST00000618081 ACO1P21399 889 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 WEE1P30291 646 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MAGEA10P43363 369 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 HLA-DQA1Q5Y7H0 255 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 C11orf88Q6PI97 169 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 STARD7Q9NQZ5 370 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TRPC4Q9UBN4 977 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 STK39Q9UEW8 545 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 A0A088AWK7 358 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ALDH2P05091 517 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 THRAP10827 490 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF10P21506 573 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TMED10P49755 219 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MAD2L1Q13257 205 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PRR5LQ6MZQ0 368 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MPZL3Q6UWV2 235 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ALG6Q9Y672 507 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 USP32Q8NFA0 1604 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 COILP38432 576 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ERFP50548 548 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 BARGINQ6ZT62 677 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF518BQ9C0D4 1074 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 CPS1P31327 1500 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 CYP24A1Q07973 514 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 EFEMP1Q12805 493 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 STX4Q12846 297 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 SAMD3Q8N6K7 520 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 CSGALNACT1Q8TDX6 532 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 DNAJC9Q8WXX5 260 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 WDR24Q96S15 920 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 SLC24A3Q9HC58 644 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 COMMD8Q9NX08 183 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 POLG2Q9UHN1 485 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MED14O60244 1454 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PSMC3P17980 439 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TNNI3P19429 210 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 RHOAP61586 193 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PURAQ00577 322 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 DDR2Q16832 855 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TMEM154Q6P9G4 183 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 NEXMIFQ5QGS0 1516 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MAGEB16A2A368 324 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ZNF682O95780 498 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 VDRP11473 427 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 IFNGR2P38484 337 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 POLR2LP62875 67 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 SF3B3Q15393 1217 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 VANGL2Q9ULK5 521 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 CNOT3O75175 753 aaKnown RBP11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 TPBGLP0DKB5 382 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 HPCAL1P37235 193 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PSMC6P62333 389 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 PPIL2Q13356 520 aa11.49□□□□□ -0.57
CCDC144B-208ENST00000618081 MIER2Q8N344 545 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms