RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 LOXL4Q96JB6 756 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 TIGD1Q96MW7 591 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 DUSP15Q9H1R2 295 aaPredicted RBP23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 ARRDC1-AS1Q9H2J1 176 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 ARHGEF4Q9NR80 690 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 SPHK2Q9NRA0 654 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 NUDT5Q9UKK9 219 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 COQ4Q9Y3A0 265 aa23.43■■□□□ 1.34
NEDD4L-237ENST00000617539 MYO18AQ92614 2054 aaKnown RBP23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 MDM4O15151 490 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 STX10O60499 249 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 SDHBP21912 280 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 MRPS21P82921 87 aaKnown RBP23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 FKBP3Q00688 224 aaKnown RBP23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 GAD2Q05329 585 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 PLK5Q496M5 336 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 NAT16Q8N8M0 369 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 TSTD1Q8NFU3 115 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 SMARCE1Q969G3 411 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 TMEM176AQ96HP8 235 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 HEXIM2Q96MH2 286 aaKnown RBP23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 ZDHHC4Q9NPG8 344 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 USP3Q9Y6I4 520 aa23.42■■□□□ 1.34
NEDD4L-237ENST00000617539 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 SGK1O00141 431 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TRIM24O15164 1050 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TULP3O75386 442 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 SMC2O95347 1197 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 APODP05090 189 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 RARGP13631 454 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TIE1P35590 1138 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 ATP5C1P36542 298 aaKnown RBP23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 GRIA2P42262 883 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 DGKEP52429 567 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 SF3A2Q15428 464 aaKnown RBP23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 CRY1Q16526 586 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TCERG1LQ5VWI1 586 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 CCDC186Q7Z3E2 898 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TXNDC5Q8NBS9 432 aaKnown RBP23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 MDGA1Q8NFP4 955 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 SLC35C1Q96A29 364 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TSG101Q99816 390 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 TPSD1Q9BZJ3 242 aa23.41■■□□□ 1.34
NEDD4L-237ENST00000617539 ADAM23O75077 832 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 KLF8O95600 359 aaPredicted RBP23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 CD44P16070 742 aaKnown RBP23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 LRRC63Q05C16 580 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 PLA2G2CQ5R387 149 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 ARHGAP17Q68EM7 881 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 ISM2Q6H9L7 571 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 ANO7Q6IWH7 933 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 KLHDC10Q6PID8 442 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 ABCA7Q8IZY2 2146 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 NETO1Q8TDF5 533 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 P2RY11Q96G91 374 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 RTKNQ9BST9 563 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 RXFP3Q9NSD7 469 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 HCN2Q9UL51 889 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 INVSQ9Y283 1065 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 NUP205Q92621 2012 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 SPTBN2O15020 2390 aa23.4■■□□□ 1.34
NEDD4L-237ENST00000617539 DCDC2BA2VCK2 349 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 BMP6P22004 513 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 TNFRSF4P43489 277 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 ANO4Q32M45 955 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 Q6ZNB5 142 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 TTC30AQ86WT1 665 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 TTC39CQ8N584 583 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 CNOT6LQ96LI5 555 aaKnown RBP23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 SMOC1Q9H4F8 434 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 NAGPAQ9UK23 515 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 MAN1B1Q9UKM7 699 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 THADAQ6YHU6 1953 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 PLXND1Q9Y4D7 1925 aa23.39■■□□□ 1.33
NEDD4L-237ENST00000617539 SLC30A4O14863 429 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 ZNF806P0C7X5 589 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 CUL2Q13617 745 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 RAB41Q5JT25 222 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 C10orf120Q5SQS8 335 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 ZNF276Q8N554 614 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 FAM124BQ9H5Z6 455 aaPredicted RBP23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 ARMCX3Q9UH62 379 aaPredicted RBP23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 DNMT3LQ9UJW3 386 aa23.38■■□□□ 1.33
NEDD4L-237ENST00000617539 TULP2O00295 520 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 BCKDHBP21953 392 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 MPLP40238 635 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 HSF5Q4G112 596 aaPredicted RBP23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 BTBD8Q5XKL5 378 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 PIGZQ86VD9 579 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 ELOA2Q8IYF1 753 aaPredicted RBP23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 UBR7Q8N806 425 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 TERB1Q8NA31 727 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 OLIG1Q8TAK6 271 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 DNAI2Q9GZS0 605 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 CLIC5Q9NZA1 410 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 MARK1Q9P0L2 795 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 DEC1Q9P2X7 70 aa23.37■■□□□ 1.33
NEDD4L-237ENST00000617539 PCDHGA5Q9Y5G8 931 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms