RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 SESN3P58005 492 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 INCA1Q0VD86 236 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 KYNUQ16719 465 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 PABPC1LQ4VXU2 614 aaKnown RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 IZUMO3Q5VZ72 239 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 PMF1Q6P1K2 205 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 TRIM42Q8IWZ5 723 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 ARRDC4Q8NCT1 418 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 MLXIPLQ9NP71 852 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 DMAP1Q9NPF5 467 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 STRIP2Q9ULQ0 834 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 ZNF148Q9UQR1 794 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
PCDHGA9-202ENST00000616887 THSD7BQ9C0I4 1608 aa11.9□□□□□ -0.51
PCDHGA9-202ENST00000616887 MBLAC1A4D2B0 266 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 GABBR2O75899 941 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 UNC5CO95185 931 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 MIPP30301 263 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 SERPINB4P48594 390 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 GAD2Q05329 585 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 RCN2Q14257 317 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 SNX17Q15036 470 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CMPK2Q5EBM0 449 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 TFDP3Q5H9I0 405 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 IRGCQ6NXR0 463 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 RCOR2Q8IZ40 523 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 NIPA2Q8N8Q9 360 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CLEC4CQ8WTT0 213 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 LRRN4Q8WUT4 740 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 FAM136AQ96C01 138 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 TMEM237Q96Q45 408 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 WHRNQ9P202 907 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 PARP2Q9UGN5 583 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 MKI67P46013 3256 aaKnown RBP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 PDLIM1O00151 329 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 BANF1O75531 89 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 MAP3K6O95382 1288 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 PDGFRBP09619 1106 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 VDRP11473 427 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CCNB1P14635 433 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CREB1P16220 341 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 LMO2P25791 158 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 PSEN2P49810 448 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 ADAM17P78536 824 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 FASTKD3Q14CZ7 662 aaKnown RBP11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 NOTUMQ6P988 496 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 FAM47EQ6ZV65 393 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CFAP57Q96MR6 1250 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 NT5C1AQ9BXI3 368 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 GPATCH2LQ9NWQ4 482 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 ATXN10Q9UBB4 475 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 ANAPC5Q9UJX4 755 aa11.89□□□□□ -0.51
PCDHGA9-202ENST00000616887 CST8O60676 142 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 FGFR1P11362 822 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 P4HA1P13674 534 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 CCDC130P13994 396 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ARSEP51690 589 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 OTUD4Q01804 1114 aaKnown RBP11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 PLCB3Q01970 1234 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 SOWAHAQ2M3V2 549 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 DCAF4L1Q3SXM0 396 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 PPP1R2P3Q6NXS1 205 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 CAPN12Q6ZSI9 719 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 CYP4V2Q6ZWL3 525 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 SCUBE3Q8IX30 993 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 C7orf31Q8N865 590 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 FAM13CQ8NE31 585 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 OR6B3Q8NGW1 331 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ACTL9Q8TC94 416 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 GRK7Q8WTQ7 553 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 MCRS1Q96EZ8 462 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 GBP5Q96PP8 586 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ARHGAP39Q9C0H5 1083 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 SMIM35A0A1B0GVV1 85 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 RRN3P2A6NIE6 340 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 GOLGA8MH3BSY2 632 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ENTPD5O75356 428 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 TJP3O95049 919 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ITIH2P19823 946 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 AFF1P51825 1210 aaKnown RBP11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ATXN1P54253 815 aaKnown RBP11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 MGAT5Q09328 741 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 OASLQ15646 514 aaKnown RBP11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 ZBTB6Q15916 424 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 SYCP2LQ5T4T6 812 aa11.88□□□□□ -0.51
PCDHGA9-202ENST00000616887 RASIP1Q5U651 963 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms