RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 GMNNO75496 209 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 PIGRP01833 764 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 ATP4AP20648 1035 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 B3GNT9Q6UX72 402 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 KCNV2Q8TDN2 545 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 SENP8Q96LD8 212 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 RNF157Q96PX1 679 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 MTG1Q9BT17 334 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 GRID1Q9ULK0 1009 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 XIRP1Q702N8 1843 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 KCNK1O00180 336 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 BNIP3LO60238 219 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 CILPO75339 1184 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 LRCH4O75427 683 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 ITGAVP06756 1048 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 SPRP35270 261 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAP3K10Q02779 954 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 KDSRQ06136 332 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 CHI3L2Q15782 390 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 FASTKD1Q53R41 847 aaKnown RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 C1orf220Q5T0J3 134 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 ARID3BQ8IVW6 561 aaPredicted RBP13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 B3GNT5Q9BYG0 378 aa13.66□□□□□ -0.22
PPP4R3B-206ENST00000616407 O00370 1275 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 MTSS1O43312 755 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 UBOX5O94941 541 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 MMP3P08254 477 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 ERFP50548 548 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 ALDH18A1P54886 795 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 RFX8Q6ZV50 586 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 RNF180Q86T96 592 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 SEPT5Q99719 369 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 GPR88Q9GZN0 384 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 TJP2Q9UDY2 1190 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 PGK1P00558 417 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 JCHAINP01591 159 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 ENPEPQ07075 957 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 USP10Q14694 798 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 MAPRE1Q15691 268 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 SLC10A6Q3KNW5 377 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 MGAT5BQ3V5L5 792 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 UNC45BQ8IWX7 931 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 MINDY3Q9H8M7 445 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 TUBGCP4Q9UGJ1 667 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 C10orf71Q711Q0 1435 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 CCDC22O60826 627 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 PMPCBO75439 489 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 FBXO21O94952 628 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 HNRNPH1P31943 449 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 PAPOLAP51003 745 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 TAS1R3Q7RTX0 852 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 FAM161BQ96MY7 647 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 TSPYL2Q9H2G4 693 aaPredicted RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 VCX3BQ9H321 246 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 GOLGA2P5Q9HBQ8 144 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 GTSE1Q9NYZ3 720 aa13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 TNRC6CQ9HCJ0 1690 aaKnown RBP13.65□□□□□ -0.22
PPP4R3B-206ENST00000616407 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 C22orf31O95567 290 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 HOXC6P09630 235 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 MLH1P40692 756 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 SLC4A11Q8NBS3 891 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 GSDMBQ8TAX9 411 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 TCP10LQ8TDR4 215 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 HTR3CQ8WXA8 447 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 MAGEB5Q9BZ81 275 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 UPP2O95045 317 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ENO1P06733 434 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PTPN1P18031 435 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 TAC1P20366 129 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 CALRP27797 417 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ZNF235Q14590 738 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANKRD20A8PQ5CZ79 823 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 XYLT1Q86Y38 959 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ANKRD52Q8NB46 1076 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PTPRN2Q92932 1015 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 ULBP1Q9BZM6 244 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 VCXQ9H320 206 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 CATSPERBQ9H7T0 1116 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 UBP1Q9NZI7 540 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PCDHGC3Q9UN70 934 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 SCN7AQ01118 1682 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 TSPAN1O60635 241 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 SLC25A41Q8N5S1 370 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PPHLN1Q8NEY8 458 aaKnown RBP13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 FAM96AQ9H5X1 160 aa13.64□□□□□ -0.23
PPP4R3B-206ENST00000616407 PFDN4Q9NQP4 134 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms