RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 TRIM6Q9C030 488 aaPredicted RBP14.45□□□□□ -0.1
CACNA1C-231ENST00000616390 DHX35Q9H5Z1 703 aaKnown RBP14.45□□□□□ -0.1
CACNA1C-231ENST00000616390 ACSS3Q9H6R3 686 aa14.45□□□□□ -0.1
CACNA1C-231ENST00000616390 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
CACNA1C-231ENST00000616390 ITGA11Q9UKX5 1188 aa14.45□□□□□ -0.1
CACNA1C-231ENST00000616390 TCRBV9S1A1TA0A576 114 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 ZBED1O96006 694 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 FAAP100Q0VG06 881 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 NOMO1Q15155 1222 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PRAMEF19Q5SWL8 479 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PRPF39Q86UA1 669 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 SNRNP25Q9BV90 132 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 HESX1Q9UBX0 185 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 DICER1Q9UPY3 1922 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 A0A1B0GUA9 196 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PDHXO00330 501 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 APOL1O14791 398 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 INHBAP08476 426 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 FAM187BQ17R55 369 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 KLHL38Q2WGJ6 581 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 MARCH8Q5T0T0 291 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 ADGRD1Q6QNK2 874 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 OTOAQ7RTW8 1153 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 MAP7D3Q8IWC1 876 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PPTC7Q8NI37 304 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 DCAKDQ8WVC6 231 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 LRRC37BQ96QE4 947 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 GOLGA2P5Q9HBQ8 144 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 GBA2Q9HCG7 927 aaPredicted RBP14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PIH1D1Q9NWS0 290 aaKnown RBP14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 CHKBQ9Y259 395 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 MAD1L1Q9Y6D9 718 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
CACNA1C-231ENST00000616390 RPSAP08865 295 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 PYGBP11216 843 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 IL4RP24394 825 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 PCK1P35558 622 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 TFDP2Q14188 446 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 TAZQ16635 292 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 ZNF618Q5T7W0 954 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 GBP7Q8N8V2 638 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 PCDH19Q8TAB3 1148 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 LENG1Q96BZ8 264 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 SERAC1Q96JX3 654 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 FAM111AQ96PZ2 611 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 NFKBIZQ9BYH8 718 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 IRF2BPLQ9H1B7 796 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 SENP1Q9P0U3 644 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 A0A0G2JND7 137 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 PAPSS1O43252 624 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 LPXNO60711 386 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 EDF1O60869 148 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 CBX6O95503 412 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 SMPD1P17405 629 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 LMO2P25791 158 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 STIP1P31948 543 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 LRRC6Q86X45 466 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 AGGF1Q8N302 714 aaeCLIP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 OR6J1Q8NGC5 347 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 SNRNP27Q8WVK2 155 aaKnown RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 CYTH2Q99418 400 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 PCDH18Q9HCL0 1135 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 ZMYND8Q9ULU4 1186 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 STARD13Q9Y3M8 1113 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 MFHAS1Q9Y4C4 1052 aa14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 TRIP12Q14669 1992 aaPredicted RBP14.43□□□□□ -0.1
CACNA1C-231ENST00000616390 GABBR2O75899 941 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 SNAI1O95863 264 aaPredicted RBP14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 EPHX2P34913 555 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 ZNF200P98182 395 aaPredicted RBP14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 SLC6A3Q01959 620 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 INCA1Q0VD86 236 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 ACAP1Q15027 740 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 ZNF792Q3KQV3 632 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 RNF43Q68DV7 783 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 OLFML1Q6UWY5 402 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 PQLC3Q8N755 202 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 GRAMD1AQ96CP6 724 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 AGAP3Q96P47 875 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 USP29Q9HBJ7 922 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 CFAP73A6NFT4 308 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 DYNC1LI2O43237 492 aaPredicted RBP14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 UGT1A9O60656 530 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 GBE1Q04446 702 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 FAM47CQ5HY64 1035 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 LINC01465Q8N7H1 131 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 PTPRN2Q92932 1015 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 CEP41Q9BYV8 373 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 SLC13A1Q9BZW2 595 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 UGT1A7Q9HAW7 530 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 UGT1A10Q9HAW8 530 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 UGT1A8Q9HAW9 530 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 C2CD2Q9Y426 696 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 USH1CQ9Y6N9 552 aa14.42□□□□□ -0.1
CACNA1C-231ENST00000616390 DOCK3Q8IZD9 2030 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms