RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 NIPAL1Q6NVV3 410 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 SLC47A2Q86VL8 602 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 AHI1Q8N157 1196 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 C12orf43Q96C57 262 aaKnown RBP14□□□□□ -0.17
PPP4R3B-205ENST00000616288 CDY2AQ9Y6F7 541 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 CDY1Q9Y6F8 540 aa14□□□□□ -0.17
PPP4R3B-205ENST00000616288 ESYT2A0FGR8 921 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 TRAFD1O14545 582 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CST8O60676 142 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 VARSP26640 1264 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PHC1P78364 1004 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 INPP5AQ14642 412 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ABCB5Q2M3G0 1257 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 TMEM270Q6UE05 265 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 GATAD2AQ86YP4 633 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 BBS5Q8N3I7 341 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PIWIL2Q8TC59 973 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PRICKLE1Q96MT3 831 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 HNRNPABQ99729 332 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 DNAJB4Q9UDY4 337 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 GIT1Q9Y2X7 761 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CCNKO75909 580 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ZNF23P17027 643 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 INPP1P49441 399 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 RAB15P59190 212 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 GSTM4Q03013 218 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CYP2A13Q16696 494 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 OTUD3Q5T2D3 398 aaPredicted RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 NEK5Q6P3R8 708 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 SLC26A11Q86WA9 606 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 XXYLT1Q8NBI6 393 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 STARD8Q92502 1023 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 RPRD1BQ9NQG5 326 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ST14Q9Y5Y6 855 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 A8MU76 341 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 RBP3P10745 1247 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 IDO1P14902 403 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ALOX12P18054 663 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CDK9P50750 372 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 SLFN11Q7Z7L1 901 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 SYTL1Q8IYJ3 562 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PCDH20Q8N6Y1 951 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ZFYVE28Q9HCC9 887 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 VPS45Q9NRW7 570 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 H3BNX3 289 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 H6PDO95479 791 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 OSBPP22059 807 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 GRK2P25098 689 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 TTKP33981 857 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 CDO1Q16878 200 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PAGE2BQ5JRK9 111 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 RCOR2Q8IZ40 523 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ADCY4Q8NFM4 1077 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 VTA1Q9NP79 307 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 HSFX1Q9UBD0 423 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 ZBTB1Q9Y2K1 713 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 FAM32AQ9Y421 112 aaKnown RBP13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PCDHGA3Q9Y5H0 932 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
PPP4R3B-205ENST00000616288 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 FYNP06241 537 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 COX4I1P13073 169 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 MTX3Q5HYI7 312 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 ZNF410Q86VK4 478 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 ANKLE1Q8NAG6 615 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 TMIGD2Q96BF3 282 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 FGFBP2Q9BYJ0 223 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 KBTBD13C9JR72 458 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 CYB561D2O14569 222 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 NLRP11P59045 1033 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 DNASE1L3Q13609 305 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 POLD3Q15054 466 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 TMTC4Q5T4D3 741 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 DNAAF3Q8N9W5 541 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 HDAC2Q92769 488 aaKnown RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 ACCSQ96QU6 501 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 TXLNGYQ9BZA5 131 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 GLT8D2Q9H1C3 349 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 ZNF395Q9H8N7 513 aaPredicted RBP13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 MYH7P12883 1935 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 CENPXA8MT69 81 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 HLA-DOAP06340 250 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 RFX1P22670 979 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 KRT6CP48668 564 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 SLC12A1Q13621 1099 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 SLC15A3Q8IY34 581 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 OSBPL11Q9BXB4 747 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 TPK1Q9H3S4 243 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 STXBP5LQ9Y2K9 1186 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 IPPQ9Y573 584 aa13.98□□□□□ -0.17
PPP4R3B-205ENST00000616288 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
PPP4R3B-205ENST00000616288 HNRNPDLO14979 420 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms