RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 SLC44A1Q8WWI5 657 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ZNF606Q8WXB4 792 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ATP2A3Q93084 1043 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CMTM5Q96DZ9 223 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 THAP11Q96EK4 314 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TRPV6Q9H1D0 765 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 KCNH7Q9NS40 1196 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 THEGQ9P2T0 379 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SLC17A6Q9P2U8 582 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 POLLQ9UGP5 575 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 PLLPQ9Y342 182 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SH3GLB1Q9Y371 365 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SNCAIPQ9Y6H5 919 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ATRNL1Q5VV63 1379 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ZNF536O15090 1300 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CASQ2O14958 399 aaPredicted RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 SIN3BO75182 1162 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TNFAIP8O95379 198 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ZBED1O96006 694 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 F7P08709 466 aaPredicted RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 KRT19P08727 400 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 KRT3P12035 628 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TM4SF1P30408 202 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RFC1P35251 1148 aaPredicted RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 SLC1A6P48664 564 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CDH6P55285 790 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CDH15P55291 814 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 OSTNP61366 133 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 OGDHQ02218 1023 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 ART3Q13508 389 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ITGA9Q13797 1035 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 DPYSL3Q14195 570 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 MAP7D1Q3KQU3 841 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 AAGABQ6PD74 315 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TRMT10BQ6PF06 316 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 FRMD7Q6ZUT3 714 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ANKRD23Q86SG2 305 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CHSY1Q86X52 802 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CLVS1Q8IUQ0 354 aaPredicted RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 GPD1LQ8N335 351 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.91□□□□□ -1.3
LMO3-235ENST00000616247 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.91□□□□□ -1.3
LMO3-235ENST00000616247 PIWIL2Q8TC59 973 aaKnown RBP6.91□□□□□ -1.3
LMO3-235ENST00000616247 CERKQ8TCT0 537 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 NLRP7Q8WX94 980 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 TMIGD2Q96BF3 282 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 MARK4Q96L34 752 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 KCNK16Q96T55 309 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CCDC28BQ9BUN5 200 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 YIPF2Q9BWQ6 316 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 DBNDD1Q9H9R9 158 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 RRN3Q9NYV6 651 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 UBAP1Q9NZ09 502 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 NARFQ9UHQ1 456 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 ARHGAP26Q9UNA1 814 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 USP54Q70EL1 1684 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 NUP98P52948 1817 aa6.91□□□□□ -1.3
LMO3-235ENST00000616247 CAPN14A8MX76 684 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 GIPC1O14908 333 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 CSDE1O75534 798 aaKnown RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 PDGFRBP09619 1106 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 MX2P20592 715 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 OSBPP22059 807 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 RXRBP28702 533 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 MLH1P40692 756 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 CDKN2BP42772 138 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ETV4P43268 484 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ABCG1P45844 678 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ENTPD1P49961 510 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 SESN2P58004 480 aaPredicted RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 PSMC1P62191 440 aaKnown RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 CUL2Q13617 745 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 PRKG1Q13976 671 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 TCEAL1Q15170 157 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 NFIL3Q16649 462 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 N4BP2L1Q5TBK1 243 aaPredicted RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 C16orf87Q6PH81 154 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ZBTB33Q86T24 672 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 PATL1Q86TB9 770 aaKnown RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 TMEM35BQ8NCS4 154 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ACER1Q8TDN7 264 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ARHGEF1Q92888 912 aaKnown RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 ZBTB45Q96K62 511 aaPredicted RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 PRICKLE1Q96MT3 831 aaPredicted RBP6.9□□□□□ -1.3
LMO3-235ENST00000616247 WRNIP1Q96S55 665 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 SMYD2Q9NRG4 433 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 THAP1Q9NVV9 213 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 GPATCH2LQ9NWQ4 482 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 ZNF510Q9Y2H8 683 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 DOCK2Q92608 1830 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 CNTNAP2Q9UHC6 1331 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 A0A1B0GUL6 1792 aa6.9□□□□□ -1.3
LMO3-235ENST00000616247 IGKV6D-41A0A0C4DH26 115 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 TRIM43BA6NCK2 446 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 COQ9O75208 318 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 ITGAVP06756 1048 aa6.9□□□□□ -1.31
LMO3-235ENST00000616247 PSMC3P17980 439 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms