RNA–Protein interactions for RNA: ENST00000616140.1

CPSF1-212, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-212ENST00000616140 ZNF268Q14587 947 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-212ENST00000616140 KRT72Q14CN4 511 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 KBTBD12Q3ZCT8 623 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 IRF2BP1Q8IU81 584 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 BRSK2Q8IWQ3 736 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 SPATA20Q8TB22 786 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 GANQ9H2C0 597 aa14.45□□□□□ -0.1
CPSF1-212ENST00000616140 TGFB3P10600 412 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SLC2A3P11169 496 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 MIPP30301 263 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 ZNF157P51786 506 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 MAP3K10Q02779 954 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 WLSQ5T9L3 541 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 IZUMO2Q6UXV1 221 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 ZPBP2Q6X784 338 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 EFL1Q7Z2Z2 1120 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 FUKQ8N0W3 1084 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SRPK1Q96SB4 655 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 UNKQ9C0B0 810 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SPATC1LQ9H0A9 340 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 C10orf88Q9H8K7 445 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SPON1Q9HCB6 807 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 ARMCX1Q9P291 453 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 ODC1P11926 461 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 MARCKSL1P49006 195 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 NME5P56597 212 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 MAP3K7CLP57077 242 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 CYLC2Q14093 348 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 DACT2Q5SW24 774 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SCUBE3Q8IX30 993 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 DEFB107AQ8IZN7 70 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 ZNF786Q8N393 782 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 GFM2Q969S9 779 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 FAM162AQ96A26 154 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 OTULINQ96BN8 352 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 REXO2Q9Y3B8 237 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 VWDEQ8N2E2 1590 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 EVPLLA8MZ36 301 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 TRPC1P48995 793 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 TRMT5Q32P41 509 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SYTL3Q4VX76 610 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 N4BP2L1Q5TBK1 243 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 AKT1S1Q96B36 256 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 TBCBQ99426 244 aa14.44□□□□□ -0.1
CPSF1-212ENST00000616140 UBE2OQ9C0C9 1292 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 SAE1Q9UBE0 346 aaPredicted RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 TRMT6Q9UJA5 497 aaKnown RBP14.44□□□□□ -0.1
CPSF1-212ENST00000616140 CFAP99D6REC4 459 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 M0R3G1 203 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 TKTL1P51854 596 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CNTN2Q02246 1040 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 BST2Q10589 180 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CSHL1Q14406 222 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 KCTD19Q17RG1 926 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 IYDQ6PHW0 289 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 NIPA1Q7RTP0 329 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 ADCK2Q7Z695 626 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 MICU2Q8IYU8 434 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 POU5F2Q8N7G0 328 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 STKLD1Q8NE28 680 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CCDC126Q96EE4 140 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 VPS50Q96JG6 964 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 FOPNLQ96NB1 174 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 PRPF18Q99633 342 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 C17orf80Q9BSJ5 609 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 TBC1D23Q9NUY8 699 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 DEAF1O75398 565 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 SHBGP04278 402 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 SERPIND1P05546 499 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CYP3A4P08684 503 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 HNRNPH3P31942 346 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CPT1AP50416 773 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 HUNKP57058 714 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 AMPD2Q01433 879 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 ARHGEF7Q14155 803 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 FUT11Q495W5 492 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 PRELID2Q8N945 189 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 INPP4AQ96PE3 977 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 MROH8Q9H579 483 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 GPAMQ9HCL2 828 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 DDX28Q9NUL7 540 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CRLS1Q9UJA2 301 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 VANGL2Q9ULK5 521 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 ASTN1O14525 1302 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 WNT10BO00744 389 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 PSMA4P25789 261 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 FAAP100Q0VG06 881 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 RRP1BQ14684 758 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 POU6F1Q14863 301 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 SNX17Q15036 470 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 SNX30Q5VWJ9 437 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 TMPRSS6Q8IU80 811 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 P3H2Q8IVL5 708 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 DNERQ8NFT8 737 aa14.43□□□□□ -0.1
CPSF1-212ENST00000616140 LNX1Q8TBB1 728 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 ZNF75CPQ92670 426 aaPredicted RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 CELF6Q96J87 481 aaKnown RBP14.43□□□□□ -0.1
CPSF1-212ENST00000616140 PSMD10O75832 226 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms