RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ST3GAL2Q16842 350 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 PSAPL1Q6NUJ1 521 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 CLEC20AQ6ZU45 233 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 TERB1Q8NA31 727 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 JAKMIP2Q96AA8 810 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 APOBEC3GQ9HC16 384 aaKnown RBP21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 TLR8Q9NR97 1041 aaKnown RBP21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 DEC1Q9P2X7 70 aa21.95■■□□□ 1.1
TRAPPC3-208ENST00000616074 USP24Q9UPU5 2620 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 CEP192Q8TEP8 1941 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 HHLA1C9JL84 531 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 CYP26A1O43174 497 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRIM49P0CI25 452 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRIM49CP0CI26 452 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 VAMP7P51809 220 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 INCA1Q0VD86 236 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 C10orf76Q5T2E6 689 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 HTR3DQ70Z44 454 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 ZNF513Q8N8E2 541 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 PIGKQ92643 395 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 SPACA7Q96KW9 195 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 SPATA32Q96LK8 384 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 HNRNPABQ99729 332 aaKnown RBP21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 KLF16Q9BXK1 252 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 CYLDQ9NQC7 956 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 OSER1Q9NX31 292 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 MBD1Q9UIS9 605 aaPredicted RBP21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 HCN2Q9UL51 889 aa21.94■■□□□ 1.1
TRAPPC3-208ENST00000616074 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 MAPK13O15264 365 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 NR2F2P24468 414 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 GCLMP48507 274 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 MAP7D1Q3KQU3 841 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 PREPLQ4J6C6 727 aaPredicted RBP21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 ARMCX6Q7L4S7 300 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 LPCAT2Q7L5N7 544 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 TMEFF1Q8IYR6 380 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 PGBD3Q8N328 593 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 TAS1R2Q8TE23 839 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 NMUR1Q9HB89 426 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 TMEM9BQ9NQ34 198 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 SCML2Q9UQR0 700 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 FRYQ5TBA9 3013 aa21.93■■□□□ 1.1
TRAPPC3-208ENST00000616074 CDX4O14627 284 aaPredicted RBP21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 MAP3K13O43283 966 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 RHOBTB3O94955 611 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 KIF20AO95235 890 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 ACO1P21399 889 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 ATP5C1P36542 298 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 PTGER3P43115 390 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 SYKP43405 635 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 NOVA1P51513 510 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 NDUFA8P51970 172 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 IRX4P78413 519 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 SHC2P98077 582 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 PPP3CAQ08209 521 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 NFIL3Q16649 462 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 DAB2IPQ5VWQ8 1189 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRMT11Q7Z4G4 463 aaKnown RBP21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 MIB1Q86YT6 1006 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 KCNV2Q8TDN2 545 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 CYFIP2Q96F07 1278 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 NT5C1AQ9BXI3 368 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 IMPG2Q9BZV3 1241 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 MAPK8IP1Q9UQF2 711 aa21.92■■□□□ 1.1
TRAPPC3-208ENST00000616074 CEP295Q9C0D2 2601 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 A0A1W2PQH9 124 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 NEDD8-MDP1E9PL57 170 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 GIPC1O14908 333 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 MDM4O15151 490 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 CD58P19256 250 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRIM21P19474 475 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 WASP42768 502 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 KRT85P78386 507 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 DPYDQ12882 1025 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 GRAMD4Q6IC98 578 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 INTS8Q75QN2 995 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 MMRN2Q9H8L6 949 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 CYP3A43Q9HB55 503 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 PNPLA8Q9NP80 782 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 TMEM74BQ9NUR3 256 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 DNAJC17Q9NVM6 304 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 LSM7Q9UK45 103 aaKnown RBP21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 NUDT5Q9UKK9 219 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 ZDHHC9Q9Y397 364 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 STARD13Q9Y3M8 1113 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 PCDHA5Q9Y5H7 936 aa21.91■■□□□ 1.1
TRAPPC3-208ENST00000616074 ATXN2Q99700 1313 aaKnown RBP21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 FAM237AA0A1B0GTK4 181 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 CACNG3O60359 315 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 CILPO75339 1184 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 RARGP13631 454 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 HOXB2P14652 356 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 TYRP14679 529 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 GABRG2P18507 467 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 PI4KAP42356 2102 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 GOLGA8FQ08AF8 430 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 GOLGA8DPQ0D2H9 430 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 TRIM61Q5EBN2 209 aa21.9■■□□□ 1.1
TRAPPC3-208ENST00000616074 EGFLAMQ63HQ2 1017 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms