RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 KANSL3Q9P2N6 904 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 WIZO95785 1651 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 PDE2AO00408 941 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 KHDRBS3O75525 346 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 RPLP2P05387 115 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCF4-248ENST00000616053 PANX2Q96RD6 677 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 DDIT4Q9NX09 232 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 DMTF1Q9Y222 760 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 LYVE1Q9Y5Y7 322 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 USP19O94966 1318 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 ZBED6P86452 979 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 KDSRQ06136 332 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CYLC2Q14093 348 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 ZNF846Q147U1 533 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 AMHR2Q16671 573 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 ZNF333Q96JL9 665 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 FAM20AQ96MK3 541 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 GPER1Q99527 375 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 ACTR8Q9H981 624 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 VPS45Q9NRW7 570 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 UBAP1Q9NZ09 502 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 PDS5AQ29RF7 1337 aaKnown RBP13.01□□□□□ -0.33
TCF4-248ENST00000616053 TLL1O43897 1013 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 PLA2G6O60733 806 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CFIP05156 583 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 GHRP10912 638 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 GNSP15586 552 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 RBL2Q08999 1139 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 EID3Q8N140 333 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 MOXD2PA6NHM9 499 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 DDX3XO00571 662 aaKnown RBP eCLIP13.01□□□□□ -0.33
TCF4-248ENST00000616053 TRIM38O00635 465 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 GLP2RO95838 553 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 NTSP30990 170 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 SCNN1AP37088 669 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CAPZA1P52907 286 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 PLGLB1Q02325 96 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 TRIQKQ629K1 86 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 BRD9Q9H8M2 597 aa13.01□□□□□ -0.33
TCF4-248ENST00000616053 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
TCF4-248ENST00000616053 CLEC3AO75596 197 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ENO1P06733 434 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 ERVK-9P63128 1117 aa13□□□□□ -0.33
TCF4-248ENST00000616053 AMIGO1Q86WK6 493 aa13□□□□□ -0.33
TCF4-248ENST00000616053 OR10H5Q8NGA6 315 aa13□□□□□ -0.33
TCF4-248ENST00000616053 SNF8Q96H20 258 aa13□□□□□ -0.33
TCF4-248ENST00000616053 EXOC2Q96KP1 924 aa13□□□□□ -0.33
TCF4-248ENST00000616053 UBE2OQ9C0C9 1292 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 PHF11Q9UIL8 331 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ERVK-11Q9UQG0 969 aa13□□□□□ -0.33
TCF4-248ENST00000616053 BCLAF3A2AJT9 711 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 TSPAN3O60637 253 aa13□□□□□ -0.33
TCF4-248ENST00000616053 GJA8P48165 433 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ACOT2P49753 483 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ZNF57Q68EA5 555 aaPredicted RBP13□□□□□ -0.33
TCF4-248ENST00000616053 SMPD4Q9NXE4 827 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ARL2BPQ9Y2Y0 163 aa13□□□□□ -0.33
TCF4-248ENST00000616053 VAMP4O75379 141 aa13□□□□□ -0.33
TCF4-248ENST00000616053 GYS1P13807 737 aa13□□□□□ -0.33
TCF4-248ENST00000616053 MYL12AP19105 171 aa13□□□□□ -0.33
TCF4-248ENST00000616053 PUDPQ08623 228 aa13□□□□□ -0.33
TCF4-248ENST00000616053 SPANXN2Q5MJ10 180 aa13□□□□□ -0.33
TCF4-248ENST00000616053 CNPY3Q9BT09 278 aa13□□□□□ -0.33
TCF4-248ENST00000616053 CLIC4Q9Y696 253 aa13□□□□□ -0.33
TCF4-248ENST00000616053 AIM2O14862 343 aa13□□□□□ -0.33
TCF4-248ENST00000616053 POLR2LP62875 67 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 C2CD6Q53TS8 623 aa13□□□□□ -0.33
TCF4-248ENST00000616053 FGD3Q5JSP0 725 aa13□□□□□ -0.33
TCF4-248ENST00000616053 RBM23Q86U06 439 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 TRNT1Q96Q11 434 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 CHMP1AQ9HD42 196 aaPredicted RBP13□□□□□ -0.33
TCF4-248ENST00000616053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13□□□□□ -0.33
TCF4-248ENST00000616053 RPTORQ8N122 1335 aa13□□□□□ -0.33
TCF4-248ENST00000616053 H3BN98 237 aa13□□□□□ -0.33
TCF4-248ENST00000616053 FTLP02792 175 aaPredicted RBP13□□□□□ -0.33
TCF4-248ENST00000616053 PTGER2P43116 358 aa13□□□□□ -0.33
TCF4-248ENST00000616053 DNAL1Q4LDG9 190 aa13□□□□□ -0.33
TCF4-248ENST00000616053 AGAP9Q5VTM2 703 aa13□□□□□ -0.33
TCF4-248ENST00000616053 GSPT2Q8IYD1 628 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 THAP9Q9H5L6 903 aa13□□□□□ -0.33
TCF4-248ENST00000616053 CPA4Q9UI42 421 aa13□□□□□ -0.33
TCF4-248ENST00000616053 C1QTNF3-AMACRE9PGA6 284 aa13□□□□□ -0.33
TCF4-248ENST00000616053 TIMM44O43615 452 aa13□□□□□ -0.33
TCF4-248ENST00000616053 IDH3BO43837 385 aa13□□□□□ -0.33
TCF4-248ENST00000616053 HBP1O60381 514 aa13□□□□□ -0.33
TCF4-248ENST00000616053 NDUFA8P51970 172 aa13□□□□□ -0.33
TCF4-248ENST00000616053 TRIM25Q14258 630 aaKnown RBP13□□□□□ -0.33
TCF4-248ENST00000616053 CYP2A13Q16696 494 aa13□□□□□ -0.33
TCF4-248ENST00000616053 SGSM1Q2NKQ1 1148 aa13□□□□□ -0.33
TCF4-248ENST00000616053 IFNL1Q8IU54 200 aa13□□□□□ -0.33
TCF4-248ENST00000616053 ADSSL1Q8N142 457 aa13□□□□□ -0.33
TCF4-248ENST00000616053 UTP15Q8TED0 518 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms