RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PCDH19Q8TAB3 1148 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GRK7Q8WTQ7 553 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SEC14L1Q92503 715 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RNF34Q969K3 372 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PGBD4Q96DM1 585 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RBM15Q96T37 977 aaKnown RBP eCLIP3.58□□□□□ -1.84
LIG4-205ENST00000614526 HNRNPABQ99729 332 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 BEGAINQ9BUH8 593 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SIK2Q9H0K1 926 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 EPB41L4BQ9H329 900 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PCDH18Q9HCL0 1135 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MLXIPLQ9NP71 852 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SAYSD1Q9NPB0 183 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.58□□□□□ -1.84
LIG4-205ENST00000614526 SEPT10Q9P0V9 454 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MAGED2Q9UNF1 606 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 AP4E1Q9UPM8 1137 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLC27A5Q9Y2P5 690 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 NFS1Q9Y697 457 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 C9IYK1 514 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 BHMG1C9JSJ3 638 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM72CH0Y354 149 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GABRDO14764 452 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 XPO1O14980 1071 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 MCF2LO15068 1137 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 KCNN4O15554 427 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PPFIA2O75334 1257 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 AVILO75366 819 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TADA2AO75478 443 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ODC1P11926 461 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CST5P28325 142 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 RBL1P28749 1068 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RPL22P35268 128 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 MAP2K2P36507 400 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 LHX1P48742 406 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MRPS5P82675 430 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 DEUP1Q05D60 604 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 GABPB1Q06547 395 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 PTK6Q13882 451 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD20A8PQ5CZ79 823 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ERMARDQ5T6L9 678 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM72AQ5TYM5 149 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM72DQ6L9T8 149 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FOXR1Q6PIV2 292 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CD300LGQ6UXG3 332 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MRPL10Q7Z7H8 261 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM72BQ86X60 149 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TTC9BQ8N6N2 239 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ATAD1Q8NBU5 361 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CCDC110Q8TBZ0 833 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PXYLP1Q8TE99 480 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FNIP1Q8TF40 1166 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 DEPDC1BQ8WUY9 529 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RSPH1Q8WYR4 309 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RUBCNQ92622 972 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RNF157Q96PX1 679 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ADAM7Q9H2U9 754 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PABPC3Q9H361 631 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 IGSF5Q9NSI5 407 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PIGVQ9NUD9 493 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TBC1D13Q9NVG8 400 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 DDIT4Q9NX09 232 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FEZ2Q9UHY8 353 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 NEU2Q9Y3R4 380 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ZNF236Q9UL36 1845 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MOXD2PA6NHM9 499 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ANKRD65E5RJM6 399 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 POC1B-GALNT4F8VUJ3 575 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RIPK2O43353 540 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ZNF623O75123 536 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CABYRO75952 493 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MOCS2O96007 188 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 FYNP06241 537 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SETSIPP0DME0 302 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SRGAP2BP0DMP2 458 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CREB1P16220 341 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 RPL17P18621 184 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 ITIH2P19823 946 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 KLRC2P26717 231 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 PCK1P35558 622 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 CTCFP49711 727 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 GNGT1P63211 74 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 YWHAHQ04917 246 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLC10A2Q12908 348 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 GPNMBQ14956 572 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 OASLQ15646 514 aaKnown RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 BBS9Q3SYG4 887 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 BOLA3Q53S33 107 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 NOMO2Q5JPE7 1267 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 FAM171A1Q5VUB5 890 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 BSPRYQ5W0U4 402 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TRAF7Q6Q0C0 670 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 BBS12Q6ZW61 710 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 SLC26A9Q7LBE3 791 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 POLNQ7Z5Q5 900 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 TMEM173Q86WV6 379 aaPredicted RBP3.58□□□□□ -1.84
LIG4-205ENST00000614526 MAP7D3Q8IWC1 876 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ZBED8Q8IZ13 594 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 MREGQ8N565 214 aa3.58□□□□□ -1.84
LIG4-205ENST00000614526 ALLCQ8N6M5 410 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms