RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 ALDH5A1P51649 535 aaPredicted RBP5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 EIF4A1P60842 406 aaKnown RBP5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 FAM187BQ17R55 369 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 RRAGBQ5VZM2 374 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 KRT73Q86Y46 540 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 PNPLA1Q8N8W4 532 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 ADAMTS18Q8TE60 1221 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 VPS50Q96JG6 964 aa5.97□□□□□ -1.45
SCAMP1-205ENST00000614488 RASA4BC9J798 803 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 RASA4O43374 803 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 MT-CO3P00414 261 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 TUBB4AP04350 444 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 CDK4P11802 303 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 ATICP31939 592 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 EZH2Q15910 746 aaKnown RBP5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 ZKSCAN2Q63HK3 967 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 CRTC1Q6UUV9 634 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 CLEC9AQ6UXN8 241 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 C11orf44Q8N8P7 122 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 CCDC150Q8NCX0 1101 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 BRI3BPQ8WY22 251 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 DDB2Q92466 427 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 LRRC46Q96FV0 321 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 LPAR3Q9UBY5 353 aa5.96□□□□□ -1.46
SCAMP1-205ENST00000614488 SETD1BQ9UPS6 1966 aaKnown RBP5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 H3BNC9 293 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 GCATO75600 419 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 IDEP14735 1019 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 EPHB2P29323 1055 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 COPB1P53618 953 aaKnown RBP5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 CFHR3Q02985 330 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 PICALMQ13492 652 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 LARS2Q15031 903 aaKnown RBP5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 FAXCQ5TGI0 409 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 MRNIPQ6NTE8 343 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 FSTL5Q8N475 847 aaPredicted RBP5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 SUN3Q8TAQ9 357 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 AS3MTQ9HBK9 375 aa5.95□□□□□ -1.46
SCAMP1-205ENST00000614488 PPP6CO00743 305 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 CCNT2O60583 730 aaKnown RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 COQ9O75208 318 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 WDR47O94967 919 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 MYL3P08590 195 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 HMGB1P09429 215 aaKnown RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 TMEM225BP0DP42 221 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 ARP10275 920 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 CYP2A6P11509 494 aaPredicted RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 TNFSF4P23510 183 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 MST1P26927 711 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 AK2P54819 239 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 TXNL4AP83876 142 aaKnown RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 GPS1Q13098 491 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 MTAPQ13126 283 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 PMS2P11Q13670 270 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 ACOX1Q15067 660 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 ABLIM2Q6H8Q1 611 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 KIAA0408Q6ZU52 694 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 NEK8Q86SG6 692 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 GALNT16Q8N428 558 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 OR2C3Q8N628 320 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 C12orf76Q8N812 135 aaPredicted RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 MAFAQ8NHW3 353 aaPredicted RBP5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 ABHD5Q8WTS1 349 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 SNX27Q96L92 541 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 CCDC17Q96LX7 622 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 WDR24Q96S15 920 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 GDF15Q99988 308 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 TMOD4Q9NZQ9 345 aa5.94□□□□□ -1.46
SCAMP1-205ENST00000614488 TMEM232C9JQI7 657 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 FGF18O76093 207 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 CYP2D6P10635 497 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 GABRB3P28472 473 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 DGKQP52824 942 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 SSBP2P81877 361 aaPredicted RBP5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 DEUP1Q05D60 604 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 FHL3Q13643 280 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 SRSF7Q16629 238 aaKnown RBP eCLIP5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 SLC5A9Q2M3M2 681 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 ARL13BQ3SXY8 428 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 HIBCHQ6NVY1 386 aaPredicted RBP5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 TMEM65Q6PI78 240 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 ZNF813Q6ZN06 617 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 DCDC5Q6ZRR9 648 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 CCDC28AQ8IWP9 274 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 EDC3Q96F86 508 aaKnown RBP5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 C5orf34Q96MH7 638 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 RIPOR3Q96MK2 946 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 ASAP1Q9ULH1 1129 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 PHTF1Q9UMS5 762 aa5.93□□□□□ -1.46
SCAMP1-205ENST00000614488 OR2W5A6NFC9 320 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 DNAJC9-AS1A6NH13 148 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 NCK2O43639 380 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 CBFA2T3O75081 653 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 EGR1P18146 543 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 ABCG1P45844 678 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 SLC35G1Q2M3R5 365 aa5.92□□□□□ -1.46
SCAMP1-205ENST00000614488 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms